Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BCF_RS20735 | Genome accession | NC_016779 |
| Coordinates | 3983523..3984566 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013200.1 | Uniprot ID | A0AA96SWA8 |
| Organism | Bacillus cereus F837/76 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3978523..3989566
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCF_RS20690 (bcf_21050) | - | 3978950..3979150 (-) | 201 | WP_000106084.1 | YqzE family protein | - |
| BCF_RS20695 (bcf_21060) | aroK | 3979189..3979686 (-) | 498 | WP_000836631.1 | shikimate kinase AroK | - |
| BCF_RS20700 (bcf_21065) | - | 3979807..3980457 (-) | 651 | WP_000183851.1 | 2OG-Fe(II) oxygenase | - |
| BCF_RS20705 (bcf_21070) | comGG | 3980633..3981004 (-) | 372 | WP_001231191.1 | competence type IV pilus minor pilin ComGG | - |
| BCF_RS20710 (bcf_21075) | comGF | 3981001..3981471 (-) | 471 | WP_000923089.1 | competence type IV pilus minor pilin ComGF | - |
| BCF_RS20715 (bcf_21080) | comGE | 3981441..3981743 (-) | 303 | WP_000829458.1 | competence type IV pilus minor pilin ComGE | - |
| BCF_RS20720 (bcf_21085) | comGD | 3981736..3982191 (-) | 456 | WP_000810393.1 | comG operon protein ComGD | - |
| BCF_RS20725 (bcf_21090) | comGC | 3982188..3982487 (-) | 300 | WP_001178696.1 | comG operon protein ComGC | - |
| BCF_RS20730 (bcf_21095) | comGB | 3982499..3983530 (-) | 1032 | WP_000471906.1 | comG operon protein ComGB | - |
| BCF_RS20735 (bcf_21100) | comGA | 3983523..3984566 (-) | 1044 | WP_001013200.1 | competence protein ComGA | Machinery gene |
| BCF_RS20740 (bcf_21105) | - | 3984772..3985467 (+) | 696 | WP_000434117.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| BCF_RS20745 (bcf_21110) | - | 3985593..3985835 (+) | 243 | WP_000440711.1 | DUF2626 domain-containing protein | - |
| BCF_RS20750 (bcf_21115) | - | 3985943..3987337 (+) | 1395 | WP_001094329.1 | L-cystine transporter | - |
| BCF_RS20755 (bcf_21120) | - | 3987554..3987769 (-) | 216 | WP_001008320.1 | DUF3912 family protein | - |
| BCF_RS20760 (bcf_21125) | - | 3988023..3988334 (+) | 312 | WP_001093243.1 | hypothetical protein | - |
| BCF_RS20765 (bcf_21130) | - | 3988371..3988859 (-) | 489 | WP_000764279.1 | hypothetical protein | - |
| BCF_RS20770 (bcf_21135) | - | 3988939..3989313 (-) | 375 | WP_001012350.1 | nucleoside 2-deoxyribosyltransferase | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39412.97 Da Isoelectric Point: 9.2147
>NTDB_id=43343 BCF_RS20735 WP_001013200.1 3983523..3984566(-) (comGA) [Bacillus cereus F837/76]
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=43343 BCF_RS20735 WP_001013200.1 3983523..3984566(-) (comGA) [Bacillus cereus F837/76]
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.925 |
100 |
0.579 |
| pilB | Vibrio campbellii strain DS40M4 |
35.977 |
100 |
0.366 |