Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   EGM181_RS07870 Genome accession   NZ_CP050485
Coordinates   1531623..1533440 (+) Length   605 a.a.
NCBI ID   WP_113849879.1    Uniprot ID   A0AAE7MPC3
Organism   Enterococcus gallinarum strain EGM181     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1526623..1538440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGM181_RS07850 (EGM181_07885) - 1526882..1528597 (+) 1716 WP_113849881.1 ABC transporter ATP-binding protein -
  EGM181_RS07855 (EGM181_07890) spxA 1529275..1529673 (+) 399 WP_003127030.1 transcriptional regulator SpxA -
  EGM181_RS07860 (EGM181_07895) - 1529828..1530478 (+) 651 WP_003127031.1 adaptor protein MecA -
  EGM181_RS07865 (EGM181_07900) - 1530561..1531556 (+) 996 WP_113849880.1 competence protein CoiA -
  EGM181_RS07870 (EGM181_07905) pepF 1531623..1533440 (+) 1818 WP_113849879.1 oligoendopeptidase F Regulator
  EGM181_RS07875 (EGM181_07910) - 1533627..1533875 (+) 249 WP_113849878.1 hypothetical protein -
  EGM181_RS07880 (EGM181_07915) - 1533980..1534636 (-) 657 WP_113849877.1 DsbA family protein -
  EGM181_RS07885 (EGM181_07920) - 1534725..1535318 (-) 594 WP_103299934.1 CYTH domain-containing protein -
  EGM181_RS07890 (EGM181_07925) - 1535514..1536167 (+) 654 WP_021151082.1 GTP pyrophosphokinase family protein -
  EGM181_RS07895 (EGM181_07930) - 1536173..1536970 (+) 798 WP_029486937.1 NAD kinase -
  EGM181_RS07900 (EGM181_07935) - 1536976..1537875 (+) 900 WP_003127040.1 RluA family pseudouridine synthase -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 68812.27 Da        Isoelectric Point: 4.6378

>NTDB_id=433259 EGM181_RS07870 WP_113849879.1 1531623..1533440(+) (pepF) [Enterococcus gallinarum strain EGM181]
MSETKQLPDRADLPEALTWDLTKIYADDGAFEEAFQEIVAELKQADDFKGTLSQGPAAFKEALEYVLAISRKLEKLYVYS
HLKNDQDTANTTYQGLYAKASNLVAQVSEAIAWFDPELLSMDDATIWGYFDQEPELAIYRHLIEKTVNNRSHVLPAEQEA
LLAGAGEIFGASGNIFSVLNNADLEFPIVEDENGEKVQLSHGVYGQLMENTDRSVREAAFKGLYGVYEQFRNTFAQTLST
NIKAHNFKAKARHYESARQAALSANHIPESVYDTLVAVVNEHLPLLHRYMELRKRLLTVDTLHMYDVYTPILGEAPIRYS
YEEAVAKAKDALKPLGEEYLAVVNEAFENRWIDVVENKGKRSGAYSSGAYDTLPYILMNWNDRLDQLFTLVHEMGHSVHS
YFTRNNQPYVYGDYSIFLAEIASTTNENILTEYMLQTETDPRVKAYVLNHFLDGFKGTIFRQTQFAEFEHFMHVEDAKGT
PLTSEFLSDSYGELNAKYYGPSVEKDPEISLEWSRIPHFYYNYYVYQYATGFSAASALAKKILTGEPDALTKYLTYLKAG
NSDYPIEVMKKAGVDMTKADYIKDAMKVFEQRLDELEALVKELEA

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=433259 EGM181_RS07870 WP_113849879.1 1531623..1533440(+) (pepF) [Enterococcus gallinarum strain EGM181]
ATGTCAGAAACAAAACAATTACCAGATCGTGCGGATCTACCGGAAGCATTAACATGGGACCTTACAAAGATCTATGCCGA
TGATGGGGCATTTGAAGAAGCGTTCCAAGAGATCGTGGCTGAGTTGAAGCAGGCTGATGATTTCAAAGGGACATTATCAC
AAGGACCAGCAGCTTTCAAGGAAGCATTAGAATATGTGTTAGCGATCTCCCGTAAACTGGAAAAACTCTATGTATACAGT
CATCTGAAAAATGATCAAGATACAGCCAACACAACCTATCAAGGGCTTTATGCAAAAGCCAGCAACCTTGTTGCTCAAGT
AAGTGAAGCGATTGCCTGGTTTGATCCTGAATTGCTTTCAATGGATGATGCAACTATTTGGGGGTATTTCGACCAAGAGC
CGGAATTGGCCATTTACCGCCATCTTATTGAAAAAACTGTCAATAACCGTTCCCATGTTTTGCCGGCTGAACAAGAAGCT
TTACTAGCAGGTGCAGGAGAAATATTCGGCGCTTCTGGAAATATTTTTTCCGTATTAAACAATGCCGATTTAGAATTTCC
GATCGTTGAAGACGAGAATGGAGAGAAAGTTCAATTATCTCATGGTGTTTATGGTCAATTGATGGAAAATACCGACCGTT
CCGTACGGGAAGCTGCCTTTAAAGGGTTGTATGGTGTCTATGAGCAGTTCCGTAATACATTTGCCCAAACATTAAGTACC
AATATCAAAGCCCATAACTTTAAAGCTAAAGCACGCCACTATGAGTCTGCTCGACAAGCTGCATTAAGTGCCAACCACAT
CCCGGAAAGTGTCTATGACACCTTGGTAGCTGTCGTGAATGAACATTTGCCGCTGCTGCATCGTTACATGGAGTTAAGAA
AACGCTTATTGACTGTTGATACTTTGCATATGTATGATGTCTATACACCAATTCTAGGGGAAGCTCCGATTCGCTATAGC
TATGAAGAAGCTGTCGCAAAAGCCAAAGATGCTTTAAAACCTCTAGGTGAAGAATATTTAGCCGTGGTAAACGAAGCGTT
TGAAAATCGCTGGATCGATGTTGTCGAAAATAAAGGCAAACGCAGTGGCGCCTATTCATCTGGCGCGTACGACACATTAC
CCTATATTTTGATGAACTGGAATGATCGTTTGGATCAATTGTTCACATTGGTGCATGAGATGGGTCACAGTGTCCACAGT
TATTTTACTCGCAACAATCAACCTTATGTTTATGGCGATTATTCCATTTTCTTGGCGGAAATTGCTTCAACAACTAACGA
GAACATCTTGACAGAATACATGTTGCAAACTGAAACTGATCCTCGCGTAAAAGCCTATGTCTTGAATCATTTTCTGGATG
GATTTAAAGGAACGATTTTCCGTCAGACACAATTTGCTGAGTTTGAACACTTTATGCACGTAGAAGATGCCAAAGGAACG
CCATTGACTAGTGAATTTTTGAGTGACAGCTATGGTGAGCTGAATGCTAAATACTACGGTCCTTCTGTAGAAAAAGATCC
TGAGATCAGTCTAGAGTGGTCACGTATCCCGCATTTTTACTACAATTACTATGTCTATCAATACGCAACAGGCTTTTCGG
CAGCTTCTGCACTAGCTAAGAAAATTTTAACAGGAGAGCCTGATGCCTTAACGAAATATTTGACCTATCTAAAAGCAGGC
AACAGCGATTATCCAATTGAAGTGATGAAAAAAGCTGGAGTTGATATGACTAAAGCAGATTATATCAAAGACGCGATGAA
AGTCTTTGAACAACGGTTGGATGAATTGGAAGCATTAGTCAAGGAATTAGAAGCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(117-186)

Peptidase family M3 (Peptidase_M3)

(207-587)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

56.397

98.182

0.554