Detailed information NTG0433192

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HB764_RS01385
• Genome accession: NZ_CP050478
• Coordinates: 296618..297625 (-)
• Length: 335 a.a.
• NCBI ID: WP_005429951.1
• Uniprot ID: A0A0A3FEU3
• Organism: Vibrio campbellii strain LJC011
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 291618..302625

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HB764_RS01355 (HB764_01355)	zapB	291696..291938 (+)	243	WP_005428165.1	cell division protein ZapB	-
HB764_RS01360 (HB764_01360)	rraA	292041..292568 (-)	528	WP_005528529.1	ribonuclease E activity regulator RraA	-
HB764_RS01365 (HB764_01365)	-	292644..293561 (-)	918	WP_010646387.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HB764_RS01370 (HB764_01370)	hslU	293870..295201 (-)	1332	WP_010646389.1	HslU--HslV peptidase ATPase subunit	-
HB764_RS01375 (HB764_01375)	hslV	295231..295782 (-)	552	WP_005435051.1	ATP-dependent protease subunit HslV	-
HB764_RS01380 (HB764_01380)	-	295898..296449 (-)	552	WP_255957463.1	SPOR domain-containing protein	-
HB764_RS01385 (HB764_01385)	cytR	296618..297625 (-)	1008	WP_005429951.1	DNA-binding transcriptional regulator CytR	Regulator
HB764_RS01390 (HB764_01390)	priA	297832..300033 (-)	2202	WP_255957465.1	primosomal protein N'	-
HB764_RS01395 (HB764_01395)	rpmE	300329..300547 (+)	219	WP_005429947.1	50S ribosomal protein L31	-
HB764_RS01400 (HB764_01400)	rpsJ	301022..301333 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
HB764_RS01405 (HB764_01405)	rplC	301348..301977 (+)	630	WP_005435072.1	50S ribosomal protein L3	-
HB764_RS01410 (HB764_01410)	rplD	301995..302597 (+)	603	WP_005435074.1	50S ribosomal protein L4	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36912.44 Da
• Isoelectric Point: 6.1645

>NTDB_id=433192 HB764_RS01385 WP_005429951.1 296618..297625(-) (cytR) [Vibrio campbellii strain LJC011]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDSAALCQFRHQGYQQALRRAGINKEEQYTVIADFSFDGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=433192 HB764_RS01385 WP_005429951.1 296618..297625(-) (cytR) [Vibrio campbellii strain LJC011]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCGACGGTATCAAGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAGAGAGTGGAAGATGCCGTACTAGAAGCTGGTTATTCACCAAATTCATTAGCTCGTAACT
TACGCAGAAATGAATCAAAAACCATTGTCACCATCGTACCGGACATTTGCGACCCGTACTTCTCAGAGATCATTCGTGGT
ATTGAAGATGCAGCAATGGAACACGGCTATCTTGTTCTATTGGGCGACAGTGGTCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTTAACTTAGTCTTTACTAAACAAGCAGATGGTATGCTTTTGCTTGGTACTGATCTGCCGTTTGATGTCAGCAAGCCTG
AACAGAAAAACCTGCCACCTATGGTGATGGCGTGTGAATTTGCTCCAGAGTTGGAACTGCCAACCGTTCATATCGATAAC
CTAACCTCAGCCTTTGAAGCAGTGAACTACCTTACTCAGTTAGGTCACAAGCGTATTGCTCAGATCTCTGGCCCAGACTC
TGCTGCTCTGTGTCAGTTCCGCCACCAAGGTTACCAACAAGCTCTGCGTCGTGCGGGTATTAATAAAGAGGAGCAATACA
CCGTTATTGCCGACTTCTCTTTTGACGGCGGAGTACAAGCCGTGCGTAAACTGCTTGAGCTTCCAGAGCCACCTACCGCC
CTATTCTGTCACTGTGACACCATGGCAATTGGTGCCATTCAAGAAGCAAAGCGCCTAGGTTTGCGTATTCCTCAAGACCT
GTCCGTTGTGGGCTTTGATGACATTCAGTTCGCTCAATACTGCGATCCACCGCTTACCACCATCTCTCAACCTCGTTATG
AGATCGGTCGCCAAGCAATGTTGATGATGCTTGAGTTGCTTAAAGGTCACGACGTACATTCTGGTTCTCGCCTACTAGAG
ACCAAACTTGTTGTGCGTGGTAGTGCAGCGCCACCGCCACTTCGATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A0A3FEU3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	95.783	99.104	0.949
cytR	Vibrio cholerae C6706	90.964	99.104	0.901