Detailed information NTG0433129

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: HB762_RS19290
• Genome accession: NZ_CP050471
• Coordinates: 620814..621911 (-)
• Length: 365 a.a.
• NCBI ID: WP_005532540.1
• Uniprot ID: -
• Organism: Vibrio campbellii strain LJC013
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 615814..626911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HB762_RS19270 (HB762_19170)	-	615836..616291 (-)	456	WP_010644874.1	Lrp/AsnC family transcriptional regulator	-
HB762_RS19275 (HB762_19175)	-	616441..617367 (+)	927	WP_255904111.1	DMT family transporter	-
HB762_RS19280 (HB762_19180)	-	617461..618123 (+)	663	WP_255904113.1	PilZ domain-containing protein	-
HB762_RS19285 (HB762_19185)	luxQ	618235..620814 (-)	2580	WP_255904115.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
HB762_RS19290 (HB762_19190)	luxP	620814..621911 (-)	1098	WP_005532540.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
HB762_RS19295 (HB762_19195)	-	622273..622602 (-)	330	WP_255904117.1	GIY-YIG nuclease family protein	-
HB762_RS19300 (HB762_19200)	-	622599..623252 (-)	654	WP_255904119.1	YceH family protein	-
HB762_RS19305 (HB762_19205)	-	623346..623549 (-)	204	WP_005433391.1	hypothetical protein	-
HB762_RS19310 (HB762_19210)	-	623788..624102 (+)	315	WP_005373603.1	DUF496 family protein	-
HB762_RS19315 (HB762_19215)	-	624226..625563 (+)	1338	WP_255904121.1	MATE family efflux transporter	-
HB762_RS19320 (HB762_19220)	-	625657..626646 (-)	990	WP_255904123.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41505.86 Da
• Isoelectric Point: 5.4809

>NTDB_id=433129 HB762_RS19290 WP_005532540.1 620814..621911(-) (luxP) [Vibrio campbellii strain LJC013]
MKKALLFSLISIVGFSPVSQATQVLNGYWGYQEFLDEFPEQRNLTNALSEAVREQPVPLSKPTKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDAAKASLAKHPDVDFIYACSTDVALGAVDALAELGREEIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEDKPVPTVYSGDFEIVTKADSPERIETLKKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=433129 HB762_RS19290 WP_005532540.1 620814..621911(-) (luxP) [Vibrio campbellii strain LJC013]
ATGAAGAAAGCGTTACTATTTTCCCTGATTTCTATAGTCGGTTTTTCTCCAGTGTCTCAAGCAACACAAGTTTTGAATGG
GTACTGGGGTTATCAAGAGTTTTTGGACGAATTTCCCGAGCAACGAAATCTCACTAATGCTTTATCAGAAGCAGTACGAG
AACAGCCGGTCCCACTGTCTAAACCGACAAAACGCCCGCTCAAAATATCAGTGGTTTACCCAGGGCAACAAGTTTCAGAT
TATTGGGTCAGAAATATTGCAGCATTCGAAAAACGTTTGGATAAGTTGAATATTAACTACCAACTGAACCAAGTGTTTAC
TCGTCCAAATGCTGATATCAAACAACAAAGCTTGTCATTAATGGAAGCGCTCAAGAGCAAATCGGATTACTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTTTTGGACTCAACGAACACCAAATTGATCTTGCAAAATATC
ACTACACCAGTCCGTGAGTGGGACAAACATCAACCGTTTTTATATGTCGGATTTGACCACGCAGAAGGCAGTCGTGAATT
GGCAACAGAATTCGGAAAGTTCTTCCCAAAACACACATATTACAGCGTACTCTACTTTTCTGAAGGTTATATTAGCGATG
TGAGAGGTGATACTTTTATTCACCAAGTAAACCGCGATAATAACTTTGAGCTACAATCAGCGTATTACACGAAAGCCACC
AAGCAATCCGGCTATGATGCTGCGAAAGCGAGTTTAGCAAAACATCCAGATGTTGATTTTATCTATGCATGTTCGACCGA
TGTAGCATTGGGTGCAGTAGACGCACTGGCTGAGTTGGGACGTGAAGAAATTATGATCAATGGCTGGGGTGGAGGCTCTG
CTGAGTTAGATGCTATCCAGAAGGGTGATTTAGATATCACTGTCATGCGTATGAATGATGATACTGGCATAGCTATGGCA
GAAGCGATTAAGTGGGACTTGGAAGATAAACCAGTTCCGACCGTATACTCAGGTGACTTTGAAATCGTAACAAAGGCAGA
TTCACCGGAGAGAATCGAAACGCTGAAAAAGCGCGCATTTAGATACTCAGATAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-322)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.384	100	0.644