Detailed information NTG0433045

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HB761_RS06330
• Genome accession: NZ_CP050467
• Coordinates: 1366965..1367972 (+)
• Length: 335 a.a.
• NCBI ID: WP_005429951.1
• Uniprot ID: A0A0A3FEU3
• Organism: Vibrio campbellii strain LJC014
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1361965..1372972

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HB761_RS06305 (HB761_06290)	rplD	1361994..1362596 (-)	603	WP_005435074.1	50S ribosomal protein L4	-
HB761_RS06310 (HB761_06295)	rplC	1362614..1363243 (-)	630	WP_005435072.1	50S ribosomal protein L3	-
HB761_RS06315 (HB761_06300)	rpsJ	1363258..1363569 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
HB761_RS06320 (HB761_06305)	rpmE	1364043..1364261 (-)	219	WP_005429947.1	50S ribosomal protein L31	-
HB761_RS06325 (HB761_06310)	priA	1364557..1366758 (+)	2202	WP_255939658.1	primosomal protein N'	-
HB761_RS06330 (HB761_06315)	cytR	1366965..1367972 (+)	1008	WP_005429951.1	DNA-binding transcriptional regulator CytR	Regulator
HB761_RS06335 (HB761_06320)	-	1368141..1368692 (+)	552	WP_005429952.1	SPOR domain-containing protein	-
HB761_RS06340 (HB761_06325)	hslV	1368808..1369359 (+)	552	WP_005435051.1	ATP-dependent protease subunit HslV	-
HB761_RS06345 (HB761_06330)	hslU	1369389..1370720 (+)	1332	WP_077201140.1	HslU--HslV peptidase ATPase subunit	-
HB761_RS06350 (HB761_06335)	-	1371029..1371946 (+)	918	WP_010646387.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HB761_RS06355 (HB761_06340)	rraA	1372022..1372549 (+)	528	WP_045379396.1	ribonuclease E activity regulator RraA	-
HB761_RS06360 (HB761_06345)	zapB	1372652..1372894 (-)	243	WP_005428165.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36912.44 Da
• Isoelectric Point: 6.1645

>NTDB_id=433045 HB761_RS06330 WP_005429951.1 1366965..1367972(+) (cytR) [Vibrio campbellii strain LJC014]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDSAALCQFRHQGYQQALRRAGINKEEQYTVIADFSFDGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=433045 HB761_RS06330 WP_005429951.1 1366965..1367972(+) (cytR) [Vibrio campbellii strain LJC014]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCGACGGTATCAAGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAGAGAGTGGAAGATGCCGTACTAGAAGCTGGTTATTCACCAAATTCATTAGCTCGTAACT
TACGCAGAAATGAATCAAAAACCATTGTCACCATCGTACCGGACATTTGCGACCCGTACTTCTCAGAGATCATTCGTGGT
ATTGAAGATGCAGCAATGGAACACGGTTATCTTGTTCTATTGGGCGACAGCGGTCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTTAACTTAGTCTTTACTAAACAAGCAGATGGTATGCTTTTGCTTGGTACTGATCTGCCGTTTGATGTCAGCAAGCCTG
AACAGAAAAACCTGCCACCTATGGTGATGGCGTGTGAATTTGCTCCAGAGTTGGAACTGCCAACCGTTCATATCGATAAC
CTAACCTCAGCCTTTGAAGCAGTGAACTATCTTACTCAGTTAGGTCATAAGCGTATTGCTCAGATCTCTGGCCCAGACTC
TGCTGCTCTGTGTCAGTTCCGCCACCAAGGTTACCAACAAGCACTGCGTCGTGCGGGTATTAATAAAGAGGAGCAATACA
CCGTTATTGCCGACTTCTCTTTTGACGGCGGAGTACAAGCCGTGCGTAAACTGCTTGAGCTTCCAGAGCCACCTACCGCT
CTATTCTGTCACTGTGACACCATGGCAATTGGTGCTATTCAAGAAGCGAAACGCCTAGGTTTGCGTATTCCTCAAGACCT
GTCCGTTGTCGGCTTTGATGACATTCAGTTCGCTCAATATTGCGATCCACCGCTAACCACCATCTCTCAACCTCGTTATG
AGATCGGTCGCCAAGCGATGTTGATGATGCTTGAGTTGCTTAAAGGTCACGACGTGCATTCTGGTTCTCGCCTACTCGAG
ACCAAACTTGTTGTGCGTGGCAGTGCAGCGCCACCGCCGCTTCGATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A0A3FEU3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	95.783	99.104	0.949
cytR	Vibrio cholerae C6706	90.964	99.104	0.901