Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   HCC49_RS19335 Genome accession   NZ_CP050462
Coordinates   314530..314694 (+) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain Htq6     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 309530..319694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCC49_RS19330 srfAB 311421..314513 (+) 3093 Protein_307 surfactin non-ribosomal peptide synthetase SrfAB -
  HCC49_RS19335 comS 314530..314694 (+) 165 WP_269195014.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=432992 HCC49_RS19335 WP_269195014.1 314530..314694(+) (comS) [Bacillus velezensis strain Htq6]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=432992 HCC49_RS19335 WP_269195014.1 314530..314694(+) (comS) [Bacillus velezensis strain Htq6]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5