Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   HCC49_RS06830 Genome accession   NZ_CP050462
Coordinates   1294398..1294862 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain Htq6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1289398..1299862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCC49_RS06810 (HCC49_06810) - 1289879..1291699 (+) 1821 WP_023356869.1 PAS domain-containing protein -
  HCC49_RS06815 (HCC49_06815) - 1291724..1292893 (-) 1170 WP_167860099.1 aminotransferase A -
  HCC49_RS06820 (HCC49_06820) - 1293094..1293255 (-) 162 WP_007409608.1 hypothetical protein -
  HCC49_RS06825 (HCC49_06825) cheV 1293444..1294355 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  HCC49_RS06830 (HCC49_06830) kre 1294398..1294862 (-) 465 WP_003154622.1 YkyB family protein Regulator
  HCC49_RS06835 (HCC49_06835) - 1294985..1296277 (-) 1293 WP_015239757.1 MFS transporter -
  HCC49_RS06840 (HCC49_06840) - 1296353..1296847 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  HCC49_RS06845 (HCC49_06845) - 1296922..1297785 (-) 864 WP_167860100.1 metallophosphoesterase -
  HCC49_RS06850 (HCC49_06850) fadH 1297930..1298694 (+) 765 WP_038463789.1 2,4-dienoyl-CoA reductase -
  HCC49_RS19420 - 1298808..1299354 (+) 547 Protein_1312 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=432945 HCC49_RS06830 WP_003154622.1 1294398..1294862(-) (kre) [Bacillus velezensis strain Htq6]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=432945 HCC49_RS06830 WP_003154622.1 1294398..1294862(-) (kre) [Bacillus velezensis strain Htq6]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929