Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   HCC49_RS05510 Genome accession   NZ_CP050462
Coordinates   1048905..1049096 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain Htq6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1043905..1054096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCC49_RS05480 (HCC49_05480) argF 1044757..1045728 (+) 972 WP_063174200.1 ornithine carbamoyltransferase -
  HCC49_RS05485 (HCC49_05485) - 1045804..1045983 (+) 180 WP_003155070.1 YjzC family protein -
  HCC49_RS05490 (HCC49_05490) - 1046020..1046205 (-) 186 WP_032874447.1 YjzD family protein -
  HCC49_RS05495 (HCC49_05495) - 1046466..1047200 (+) 735 WP_070081619.1 hypothetical protein -
  HCC49_RS05500 (HCC49_05500) - 1047283..1047849 (+) 567 WP_077722051.1 hypothetical protein -
  HCC49_RS05505 (HCC49_05505) med 1047939..1048892 (+) 954 WP_070081621.1 BMP family ABC transporter substrate-binding protein Regulator
  HCC49_RS05510 (HCC49_05510) comZ 1048905..1049096 (+) 192 WP_003155061.1 ComZ family protein Regulator
  HCC49_RS05515 (HCC49_05515) - 1049126..1049344 (-) 219 WP_003155059.1 hypothetical protein -
  HCC49_RS05520 (HCC49_05520) - 1049511..1050449 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  HCC49_RS05525 (HCC49_05525) fabF 1050472..1051710 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  HCC49_RS05530 (HCC49_05530) - 1051794..1052579 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  HCC49_RS05535 (HCC49_05535) - 1052753..1053739 (+) 987 WP_031378493.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=432938 HCC49_RS05510 WP_003155061.1 1048905..1049096(+) (comZ) [Bacillus velezensis strain Htq6]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=432938 HCC49_RS05510 WP_003155061.1 1048905..1049096(+) (comZ) [Bacillus velezensis strain Htq6]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794