Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   HCC49_RS01875 Genome accession   NZ_CP050462
Coordinates   358688..359641 (+) Length   317 a.a.
NCBI ID   WP_003156332.1    Uniprot ID   -
Organism   Bacillus velezensis strain Htq6     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 353688..364641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCC49_RS01850 (HCC49_01850) - 353732..355165 (+) 1434 WP_167859882.1 HAMP domain-containing sensor histidine kinase -
  HCC49_RS01855 (HCC49_01855) rapC 355318..356466 (+) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  HCC49_RS01860 (HCC49_01860) phrC 356450..356569 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  HCC49_RS01865 (HCC49_01865) - 356719..356814 (-) 96 WP_012116800.1 YjcZ family sporulation protein -
  HCC49_RS01870 (HCC49_01870) - 356909..358273 (-) 1365 WP_167859883.1 aspartate kinase -
  HCC49_RS01875 (HCC49_01875) ceuB 358688..359641 (+) 954 WP_003156332.1 ABC transporter permease Machinery gene
  HCC49_RS01880 (HCC49_01880) - 359631..360578 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  HCC49_RS01885 (HCC49_01885) - 360572..361330 (+) 759 WP_022552588.1 ABC transporter ATP-binding protein -
  HCC49_RS01890 (HCC49_01890) - 361352..362296 (+) 945 WP_071543293.1 siderophore ABC transporter substrate-binding protein -
  HCC49_RS01895 (HCC49_01895) - 362338..363762 (-) 1425 WP_063636989.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=432927 HCC49_RS01875 WP_003156332.1 358688..359641(+) (ceuB) [Bacillus velezensis strain Htq6]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=432927 HCC49_RS01875 WP_003156332.1 358688..359641(+) (ceuB) [Bacillus velezensis strain Htq6]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGCCCGCTTGTGAAAATGTC
TATCGCTTTTATTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTCGTTAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533