Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   G7A42_RS00485 Genome accession   NZ_CP050459
Coordinates   89871..90842 (-) Length   323 a.a.
NCBI ID   WP_016911805.1    Uniprot ID   A0A2T4PVZ9
Organism   Mammaliicoccus vitulinus strain Ani_LG-101     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 84871..95842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G7A42_RS00460 (G7A42_00460) - 85418..85939 (+) 522 WP_209354702.1 GrpB family protein -
  G7A42_RS00465 (G7A42_00465) murB 86010..86930 (+) 921 WP_016911801.1 UDP-N-acetylmuramate dehydrogenase -
  G7A42_RS00470 (G7A42_00470) - 86973..88013 (-) 1041 WP_209354703.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  G7A42_RS00475 (G7A42_00475) - 88119..88919 (-) 801 WP_016911803.1 ABC transporter ATP-binding protein -
  G7A42_RS00480 (G7A42_00480) - 88916..89881 (-) 966 WP_016911804.1 iron chelate uptake ABC transporter family permease subunit -
  G7A42_RS00485 (G7A42_00485) ceuB 89871..90842 (-) 972 WP_016911805.1 ABC transporter permease Machinery gene
  G7A42_RS00490 (G7A42_00490) - 90969..91385 (-) 417 WP_209354704.1 FixH family protein -
  G7A42_RS00495 (G7A42_00495) nrdF 91606..92577 (-) 972 WP_209354705.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  G7A42_RS00500 (G7A42_00500) nrdE 92605..94710 (-) 2106 WP_016911808.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
  G7A42_RS00505 (G7A42_00505) nrdI 94673..95071 (-) 399 WP_016911809.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35442.90 Da        Isoelectric Point: 10.5946

>NTDB_id=432869 G7A42_RS00485 WP_016911805.1 89871..90842(-) (ceuB) [Mammaliicoccus vitulinus strain Ani_LG-101]
MGKFLMRLDVLAILLVIATFFSIFIGVSEVKPLHIFNLSDEQKNILVSSRIPRTVSIIISGSSLAICGLIMQQLTRNKFV
SPTTAGTMDWARLGILISLIAFPEANILVKLLFATLLSLLGTMLFMQILQRIQFKDVIFIPLVGIMLGNIVSSFSSFVAL
RTNAVQSIGNFMQGNFSIITSGRYEILYISIPLLILAFIFANQFTIAGMGKDFSVNLGLNYQKVVNIGLIIASIITALVV
VTVGMMPFLGLIIPNLISMFRGDHLKNALPHTAIFGALFVMICDVLGRLIIFPYEITIGLTIGVIGSFIFIVMLMKGRSR
NAQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=432869 G7A42_RS00485 WP_016911805.1 89871..90842(-) (ceuB) [Mammaliicoccus vitulinus strain Ani_LG-101]
ATGGGAAAGTTTTTAATGCGTTTAGATGTTTTAGCTATATTATTAGTAATCGCAACATTTTTCTCGATTTTTATAGGTGT
CTCTGAGGTAAAACCTTTACATATATTTAATCTATCTGATGAACAAAAAAACATATTAGTATCGAGTAGGATTCCAAGAA
CAGTGAGTATTATTATTTCGGGTAGCTCTTTAGCAATTTGTGGGCTTATTATGCAACAGCTCACGCGTAATAAATTTGTT
TCGCCAACAACGGCTGGAACAATGGACTGGGCTAGATTAGGTATTTTAATTTCTTTAATTGCTTTTCCAGAGGCAAATAT
ATTAGTTAAATTACTATTTGCTACATTGTTGAGTTTGTTAGGAACAATGTTATTTATGCAAATTCTGCAAAGAATTCAAT
TCAAAGATGTCATATTCATTCCACTAGTTGGTATTATGCTCGGAAATATCGTTTCTAGTTTTTCATCTTTTGTTGCTTTA
AGAACGAATGCTGTGCAAAGTATAGGTAATTTCATGCAAGGTAATTTTTCAATTATTACAAGCGGTAGATATGAAATTTT
ATATATAAGTATTCCGTTATTGATTCTTGCATTTATATTTGCAAATCAATTTACGATTGCTGGAATGGGTAAAGATTTTA
GTGTGAACTTAGGACTTAATTATCAAAAAGTCGTCAATATCGGGCTGATTATCGCATCAATTATTACCGCGCTCGTTGTT
GTAACAGTTGGGATGATGCCTTTCTTAGGATTGATTATTCCAAACTTAATATCAATGTTTAGAGGTGATCATTTAAAAAA
TGCACTTCCACATACAGCTATTTTCGGCGCATTGTTTGTTATGATTTGTGATGTATTAGGTAGACTCATCATTTTCCCTT
ATGAAATTACAATTGGATTAACAATTGGTGTAATTGGTAGTTTTATTTTTATAGTAATGCTGATGAAAGGACGATCAAGA
AATGCTCAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(14-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2T4PVZ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.527

98.142

0.486