Detailed information NTG0432834

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G4G31_RS08860
• Genome accession: NZ_CP050451
• Coordinates: 1910747..1911871 (-)
• Length: 374 a.a.
• NCBI ID: WP_182991111.1
• Uniprot ID: A0A7G5ZBE3
• Organism: Massilia sp. Se16.2.3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1905747..1916871

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4G31_RS08835 (G4G31_08840)	-	1905791..1906495 (-)	705	WP_182991107.1	LytTR family DNA-binding domain-containing protein	-
G4G31_RS08840 (G4G31_08845)	-	1906492..1907577 (-)	1086	WP_182991108.1	sensor histidine kinase	-
G4G31_RS08845 (G4G31_08850)	rpoH	1907737..1908627 (-)	891	WP_182991109.1	RNA polymerase sigma factor RpoH	-
G4G31_RS08850 (G4G31_08855)	ftsX	1909095..1910016 (-)	922	Protein_1857	permease-like cell division protein FtsX	-
G4G31_RS08855 (G4G31_08860)	-	1910013..1910726 (-)	714	WP_182991110.1	cell division ATP-binding protein FtsE	-
G4G31_RS08860 (G4G31_08865)	pilA	1910747..1911871 (-)	1125	WP_182991111.1	signal recognition particle-docking protein FtsY	Machinery gene
G4G31_RS08865 (G4G31_08870)	-	1912101..1912874 (-)	774	WP_182991112.1	DUF4261 domain-containing protein	-
G4G31_RS08870 (G4G31_08875)	-	1913139..1914848 (-)	1710	WP_182991113.1	thiamine pyrophosphate-binding protein	-
G4G31_RS08875 (G4G31_08880)	-	1915042..1915596 (+)	555	WP_182991114.1	hypothetical protein	-
G4G31_RS08880 (G4G31_08885)	-	1915596..1915955 (+)	360	WP_182991115.1	hypothetical protein	-
G4G31_RS08885 (G4G31_08890)	-	1916019..1916510 (+)	492	WP_182991116.1	YcxB family protein	-

Sequence

Protein

• Length: 374 a.a.
• Molecular weight: 40028.29 Da
• Isoelectric Point: 5.8329

>NTDB_id=432834 G4G31_RS08860 WP_182991111.1 1910747..1911871(-) (pilA) [Massilia sp. Se16.2.3]
MFSFFKRKKAAPETPAPAQDLPVPDRPVVDSPAEDIAAAPVAETPAPGFTRALAPISEAALFIEETAERPTTEAEKKKSW
MARLKAGLSKTSSNLSLLFVGARIDEDLYEELESALLMSDAGMDATQFLLDNLRRKVKEDKLLDAAAVKAALKQLMVDML
RPLEKPLELGRHEPLVMMIAGVNGAGKTTTIGKLAKHMQRSSQSVLLAAGDTFRAAAREQLMVWGQRNNVTVISQASGDP
AAVAFDAVQSGKARGVDVVMVDTAGRLPTQLHLMEELKKIKRVIGKGMDGAPHETLLVIDGNTGQNALAQVKAFDDALQL
TGLVITKLDGTAKGGVIAAIARTRPVPVYFIGVGEKLDDLQPFSADEFVEALLG

Nucleotide

• Length: 1125 bp

>NTDB_id=432834 G4G31_RS08860 WP_182991111.1 1910747..1911871(-) (pilA) [Massilia sp. Se16.2.3]
ATGTTTAGTTTCTTCAAGAGAAAAAAAGCTGCCCCCGAAACGCCGGCACCGGCGCAGGACCTGCCCGTCCCGGATCGGCC
TGTAGTGGACTCGCCTGCCGAGGATATCGCCGCCGCGCCTGTGGCGGAAACGCCGGCGCCTGGCTTCACCCGCGCCCTGG
CCCCGATCTCCGAAGCGGCCCTTTTCATCGAGGAAACGGCCGAGCGCCCGACCACCGAGGCGGAGAAGAAAAAATCCTGG
ATGGCGCGCCTGAAGGCCGGCCTGTCCAAGACCTCGAGCAACCTGTCGCTGCTGTTCGTCGGTGCGCGCATCGACGAAGA
CCTGTACGAGGAACTCGAGTCCGCGCTCCTGATGTCGGACGCAGGCATGGACGCCACCCAGTTCCTGCTCGATAACCTGC
GCCGCAAGGTCAAGGAAGACAAGCTGCTCGACGCCGCTGCCGTCAAGGCCGCACTGAAGCAGCTCATGGTCGACATGCTG
CGCCCGCTGGAAAAACCGCTGGAGCTGGGCCGCCACGAGCCGCTGGTGATGATGATCGCGGGCGTCAACGGCGCCGGCAA
GACCACCACCATCGGCAAGCTCGCCAAGCACATGCAGCGCTCCAGCCAATCGGTGCTGCTGGCCGCCGGCGACACTTTCC
GCGCCGCTGCGCGCGAGCAGCTGATGGTCTGGGGCCAGCGCAACAACGTCACCGTGATTTCCCAGGCATCGGGCGACCCG
GCTGCCGTCGCCTTCGATGCCGTGCAGTCGGGCAAAGCGCGCGGCGTCGACGTCGTCATGGTCGATACCGCCGGCCGGCT
GCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGATCAAGCGCGTGATCGGCAAGGGCATGGATGGCGCCCCGCACG
AAACCCTGCTCGTCATCGACGGCAATACCGGCCAGAACGCGCTGGCGCAAGTGAAAGCCTTCGACGATGCGCTGCAATTG
ACCGGCCTGGTCATCACCAAGCTCGACGGTACTGCCAAGGGCGGCGTCATCGCCGCAATCGCCCGCACCCGTCCGGTACC
GGTGTACTTCATCGGCGTGGGCGAAAAGCTGGACGACCTGCAGCCTTTCAGTGCAGACGAGTTCGTTGAAGCGCTGCTGG
GATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (175-374)

• SRP54-type protein, helical bundle domain (SRP54_N) (101-154)

3D structure

• AlphaFold DB: A0A7G5ZBE3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.551	100	0.578