Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BVELS4_RS07330 Genome accession   NZ_CP050424
Coordinates   1412472..1412936 (-) Length   154 a.a.
NCBI ID   WP_167340636.1    Uniprot ID   -
Organism   Bacillus velezensis strain S4     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1407472..1417936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVELS4_RS07310 (BVELS4_01465) - 1407953..1409773 (+) 1821 WP_167340634.1 PAS domain-containing protein -
  BVELS4_RS07315 (BVELS4_01466) - 1409798..1410967 (-) 1170 WP_015417364.1 aminotransferase A -
  BVELS4_RS07320 (BVELS4_01467) - 1411168..1411329 (-) 162 WP_007409608.1 hypothetical protein -
  BVELS4_RS07325 (BVELS4_01468) cheV 1411518..1412429 (+) 912 WP_167340635.1 chemotaxis protein CheV -
  BVELS4_RS07330 (BVELS4_01469) kre 1412472..1412936 (-) 465 WP_167340636.1 YkyB family protein Regulator
  BVELS4_RS07335 (BVELS4_01470) - 1413059..1414351 (-) 1293 WP_015239757.1 MFS transporter -
  BVELS4_RS07340 (BVELS4_01471) - 1414427..1414921 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  BVELS4_RS07345 (BVELS4_01472) - 1414996..1415859 (-) 864 WP_015239758.1 metallophosphoesterase -
  BVELS4_RS07350 (BVELS4_01473) fadH 1416004..1416768 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  BVELS4_RS07355 - 1416933..1417428 (+) 496 Protein_1395 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17761.51 Da        Isoelectric Point: 10.4864

>NTDB_id=432553 BVELS4_RS07330 WP_167340636.1 1412472..1412936(-) (kre) [Bacillus velezensis strain S4]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQNLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=432553 BVELS4_RS07330 WP_167340636.1 1412472..1412936(-) (kre) [Bacillus velezensis strain S4]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGAATCTTCCGCATTTAGGTACGTTAAATCAGTCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.208

100

0.922