Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   BVELS4_RS05910 Genome accession   NZ_CP050424
Coordinates   1146908..1147861 (+) Length   317 a.a.
NCBI ID   WP_069006906.1    Uniprot ID   -
Organism   Bacillus velezensis strain S4     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1141908..1152861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVELS4_RS05885 (BVELS4_01171) argF 1143726..1144697 (+) 972 WP_007409130.1 ornithine carbamoyltransferase -
  BVELS4_RS05890 (BVELS4_01172) - 1144773..1144952 (+) 180 WP_003155070.1 YjzC family protein -
  BVELS4_RS05895 (BVELS4_01173) - 1144989..1145174 (-) 186 WP_007409129.1 YjzD family protein -
  BVELS4_RS05900 (BVELS4_01174) - 1145435..1146169 (+) 735 WP_007409127.1 hypothetical protein -
  BVELS4_RS05905 (BVELS4_01175) - 1146252..1146818 (+) 567 WP_167340600.1 hypothetical protein -
  BVELS4_RS05910 (BVELS4_01176) med 1146908..1147861 (+) 954 WP_069006906.1 BMP family ABC transporter substrate-binding protein Regulator
  BVELS4_RS05915 (BVELS4_01177) comZ 1147874..1148065 (+) 192 WP_007409124.1 ComZ family protein Regulator
  BVELS4_RS05920 (BVELS4_01178) - 1148094..1148312 (-) 219 WP_007409123.1 hypothetical protein -
  BVELS4_RS05925 (BVELS4_01179) - 1148479..1149417 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  BVELS4_RS05930 (BVELS4_01180) fabF 1149440..1150678 (+) 1239 WP_020955629.1 beta-ketoacyl-ACP synthase II -
  BVELS4_RS05935 (BVELS4_01181) - 1150761..1151546 (+) 786 WP_032866148.1 DUF2268 domain-containing protein -
  BVELS4_RS05940 (BVELS4_01182) - 1151720..1152706 (+) 987 WP_007409119.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35370.02 Da        Isoelectric Point: 4.6686

>NTDB_id=432545 BVELS4_RS05910 WP_069006906.1 1146908..1147861(+) (med) [Bacillus velezensis strain S4]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKNGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=432545 BVELS4_RS05910 WP_069006906.1 1146908..1147861(+) (med) [Bacillus velezensis strain S4]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACTATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAACGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785