Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | Y1U_RS08850 | Genome accession | NC_017927 |
| Coordinates | 1696687..1696980 (-) | Length | 97 a.a. |
| NCBI ID | WP_011226625.1 | Uniprot ID | Q5M2G2 |
| Organism | Streptococcus thermophilus MN-ZLW-002 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1691687..1701980
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Y1U_RS08815 (Y1U_C1738) | - | 1692090..1692533 (-) | 444 | WP_041829335.1 | hypothetical protein | - |
| Y1U_RS11965 (Y1U_C1739) | - | 1692607..1693026 (-) | 420 | WP_014727721.1 | CPBP family intramembrane glutamic endopeptidase | - |
| Y1U_RS08825 (Y1U_C1741) | - | 1693275..1693472 (-) | 198 | WP_014727723.1 | helix-turn-helix transcriptional regulator | - |
| Y1U_RS08830 (Y1U_C1742) | - | 1693721..1694914 (-) | 1194 | WP_014608740.1 | acetate kinase | - |
| Y1U_RS08835 (Y1U_C1743) | comGH | 1694970..1695926 (-) | 957 | WP_011226622.1 | class I SAM-dependent methyltransferase | Machinery gene |
| Y1U_RS08840 (Y1U_C1744) | comGG | 1695971..1696288 (-) | 318 | WP_002952035.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| Y1U_RS08845 (Y1U_C1745) | comGF | 1696266..1696703 (-) | 438 | WP_014608742.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| Y1U_RS08850 | comGE | 1696687..1696980 (-) | 294 | WP_011226625.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| Y1U_RS08855 (Y1U_C1747) | comGD | 1696952..1697380 (-) | 429 | WP_011226626.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| Y1U_RS08860 (Y1U_C1748) | comGC | 1697340..1697666 (-) | 327 | WP_014727724.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| Y1U_RS08865 (Y1U_C1749) | comGB | 1697663..1698763 (-) | 1101 | WP_116920398.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| Y1U_RS08870 (Y1U_C1750) | comGA/cglA/cilD | 1698645..1699586 (-) | 942 | WP_014727726.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| Y1U_RS08875 (Y1U_C1751) | - | 1699667..1700029 (-) | 363 | WP_014608746.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 97 a.a. Molecular weight: 10844.74 Da Isoelectric Point: 10.4561
>NTDB_id=43166 Y1U_RS08850 WP_011226625.1 1696687..1696980(-) (comGE) [Streptococcus thermophilus MN-ZLW-002]
MVNIKRRSLRGYILIESLVAMAVLVLVSSLILEQINTNRRLMADNLHQQEVLSVATMAVQTKQDQLTLNGIAVTVKRSQQ
GITVYESGKEIIHVSKQ
MVNIKRRSLRGYILIESLVAMAVLVLVSSLILEQINTNRRLMADNLHQQEVLSVATMAVQTKQDQLTLNGIAVTVKRSQQ
GITVYESGKEIIHVSKQ
Nucleotide
Download Length: 294 bp
>NTDB_id=43166 Y1U_RS08850 WP_011226625.1 1696687..1696980(-) (comGE) [Streptococcus thermophilus MN-ZLW-002]
GTGGTAAATATAAAAAGACGATCTCTTAGAGGTTATATTCTTATTGAAAGTCTGGTAGCTATGGCTGTTTTAGTACTTGT
CAGCAGTCTGATATTGGAACAAATTAATACCAACCGCAGACTAATGGCTGATAATCTCCATCAACAAGAGGTCTTGAGTG
TGGCAACAATGGCAGTTCAGACCAAGCAAGACCAGTTAACGCTGAATGGCATAGCGGTGACAGTTAAACGTAGCCAGCAA
GGTATCACGGTTTATGAATCGGGAAAGGAGATTATTCATGTATCTAAGCAGTAA
GTGGTAAATATAAAAAGACGATCTCTTAGAGGTTATATTCTTATTGAAAGTCTGGTAGCTATGGCTGTTTTAGTACTTGT
CAGCAGTCTGATATTGGAACAAATTAATACCAACCGCAGACTAATGGCTGATAATCTCCATCAACAAGAGGTCTTGAGTG
TGGCAACAATGGCAGTTCAGACCAAGCAAGACCAGTTAACGCTGAATGGCATAGCGGTGACAGTTAAACGTAGCCAGCAA
GGTATCACGGTTTATGAATCGGGAAAGGAGATTATTCATGTATCTAAGCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Streptococcus mutans UA140 |
43.299 |
100 |
0.433 |
| comGE | Streptococcus mutans UA159 |
43.299 |
100 |
0.433 |
| comGE | Lactococcus lactis subsp. cremoris KW2 |
36.082 |
100 |
0.361 |