Detailed information NTG0431371

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: IHV08_RS01635
• Genome accession: NZ_CP062497
• Coordinates: 294774..295895 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain CV16
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 289774..300895

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IHV08_RS01610 (IHV08_01610)	ycdA	289782..290846 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
IHV08_RS01615 (IHV08_01615)	-	290869..291000 (-)	132	WP_003246334.1	hypothetical protein	-
IHV08_RS01620 (IHV08_01620)	ycdB	291174..292592 (+)	1419	WP_192858172.1	YcdB/YcdC domain-containing protein	-
IHV08_RS01625 (IHV08_01625)	ycdC	292779..294140 (+)	1362	WP_192858173.1	YcdB/YcdC domain-containing protein	-
IHV08_RS01630 (IHV08_01630)	cwlK	294148..294651 (-)	504	WP_046380766.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
IHV08_RS01635 (IHV08_01635)	rapF	294774..295895 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
IHV08_RS01640 (IHV08_01640)	ycdF	296002..296778 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
IHV08_RS01645 (IHV08_01645)	ycdG	296803..298488 (+)	1686	WP_029317220.1	alpha-glucosidase	-
IHV08_RS01650 (IHV08_01650)	znuA	298676..299635 (+)	960	WP_129092917.1	metal ABC transporter substrate-binding protein	-
IHV08_RS01655 (IHV08_01655)	znuC	299690..300385 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=431371 IHV08_RS01635 WP_015715201.1 294774..295895(+) (rapF) [Bacillus subtilis strain CV16]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=431371 IHV08_RS01635 WP_015715201.1 294774..295895(+) (rapF) [Bacillus subtilis strain CV16]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405