Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HBK83_RS13735 Genome accession   NZ_CP050311
Coordinates   2910449..2911075 (-) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain CM18-216     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2905449..2916075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBK83_RS13720 (HBK83_13750) helD 2905688..2907742 (-) 2055 WP_163367291.1 DNA helicase IV -
  HBK83_RS13725 (HBK83_13755) - 2907865..2908311 (+) 447 WP_003858149.1 YccF domain-containing protein -
  HBK83_RS13730 (HBK83_13760) yccS 2908330..2910492 (+) 2163 WP_017384803.1 YccS family putative transporter -
  HBK83_RS13735 (HBK83_13765) sxy/tfoX 2910449..2911075 (-) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  HBK83_RS13740 (HBK83_13770) sulA 2911293..2911802 (+) 510 WP_026080726.1 SOS-induced cell division inhibitor SulA -
  HBK83_RS13745 (HBK83_13775) ompA 2912159..2913211 (+) 1053 WP_017694761.1 porin OmpA -
  HBK83_RS13750 (HBK83_13780) matP 2913277..2913729 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  HBK83_RS13755 (HBK83_13785) - 2913916..2915676 (+) 1761 WP_017384808.1 AAA family ATPase -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=431367 HBK83_RS13735 WP_017384804.1 2910449..2911075(-) (sxy/tfoX) [Enterobacter hormaechei strain CM18-216]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=431367 HBK83_RS13735 WP_017384804.1 2910449..2911075(-) (sxy/tfoX) [Enterobacter hormaechei strain CM18-216]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTAACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATTCGGGTATTGTTCGCGCTTGAAGGCGCCATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572