Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ILP75_RS08350 Genome accession   NZ_CP062471
Coordinates   1690163..1690963 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain MRSA - AMRF 3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1685163..1695963
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ILP75_RS08335 (ILP75_08335) walK 1685825..1687651 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  ILP75_RS08340 (ILP75_08340) yycH 1687644..1688978 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  ILP75_RS08345 (ILP75_08345) - 1688979..1689767 (+) 789 WP_001104176.1 two-component system regulatory protein YycI -
  ILP75_RS08350 (ILP75_08350) vicX 1690163..1690963 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  ILP75_RS08355 (ILP75_08355) adsA 1691190..1693508 (+) 2319 WP_000645792.1 LPXTG-anchored adenosine synthase AdsA -
  ILP75_RS08360 (ILP75_08360) rlmH 1693876..1694355 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ILP75_RS08365 (ILP75_08365) - 1694409..1694594 (+) 186 WP_001085091.1 hypothetical protein -
  ILP75_RS08370 (ILP75_08370) - 1694704..1695378 (-) 675 WP_011274382.1 IS6 family transposase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=431332 ILP75_RS08350 WP_000088649.1 1690163..1690963(+) (vicX) [Staphylococcus aureus strain MRSA - AMRF 3]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=431332 ILP75_RS08350 WP_000088649.1 1690163..1690963(+) (vicX) [Staphylococcus aureus strain MRSA - AMRF 3]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCAATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474