Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   HB750_RS05095 Genome accession   NZ_CP050273
Coordinates   1012701..1014503 (-) Length   600 a.a.
NCBI ID   WP_019804752.1    Uniprot ID   -
Organism   Streptococcus mutans strain P1     
Function   regulate competence (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 1010957..1018299 1012701..1014503 within 0


Gene organization within MGE regions


Location: 1010957..1018299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB750_RS05090 (HB750_05090) rcrQ 1010957..1012711 (-) 1755 WP_019804753.1 ABC transporter ATP-binding protein Regulator
  HB750_RS05095 (HB750_05095) rcrP 1012701..1014503 (-) 1803 WP_019804752.1 ABC transporter ATP-binding protein Regulator
  HB750_RS05100 (HB750_05100) rcrR 1014507..1014941 (-) 435 WP_019804751.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  HB750_RS05105 (HB750_05105) queC 1015494..1016147 (+) 654 WP_019804749.1 7-cyano-7-deazaguanine synthase QueC -
  HB750_RS05110 (HB750_05110) queD 1016147..1016593 (+) 447 WP_002281982.1 6-carboxytetrahydropterin synthase QueD -
  HB750_RS05115 (HB750_05115) queE 1016590..1017306 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  HB750_RS05120 (HB750_05120) queF 1017319..1017807 (+) 489 WP_002263288.1 preQ(1) synthase -
  HB750_RS05125 (HB750_05125) - 1017916..1018299 (+) 384 WP_002298133.1 DUF3021 family protein -

Sequence


Protein


Download         Length: 600 a.a.        Molecular weight: 66953.79 Da        Isoelectric Point: 9.6602

>NTDB_id=431268 HB750_RS05095 WP_019804752.1 1012701..1014503(-) (rcrP) [Streptococcus mutans strain P1]
MFKIFKRLNAKEWGMVLLSTAFICLAVWMDLKTPEYMSNITTLLQTKGTTASDIMDPGSKMLMFSFGSFFMAVLVGFLAS
RTAASFTTRLRSDIFNRVMDYSEAEIKKFSIPSLLTRTTNDLTQLQIMIVMGMQVVTRGPIMAVWALTKIWGKSDEWTGA
VGVAVLIVFIMLSVLMFVAFPRQRQVQSLTDALNSTTRESLTGVRVVRAYNAEDYQDTKFKRENKSLTKLNLLVYRLMSL
MNPVMTVVSSGLTLAIYWIGAYLLNDIKIPMTSVTAAKGAIADRISVFSDMVVFSSYAMQVVVGFMMMVAIFIILPRALV
SAKRINEVLALNSSVHFKEYSKADNARKGEVEFHDVSFRYSKNSRAVIEHVSFSAKAGEIVAFIGSTGSGKSTLVNLIPR
FYDATEGWIKIDGIKVQNYSHDDLNNKVGYIPQRAVLFSGTIRSNIAFGQSDQAPLDDAKIWEALELAQAKDFVEEKEKG
LDTEVAQGGTNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILRNDLAKKTKEMTKLIVAQRISTIMDADHIL
VLDQGKVVGQGTHKELLANNDIYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=431268 HB750_RS05095 WP_019804752.1 1012701..1014503(-) (rcrP) [Streptococcus mutans strain P1]
ATGTTTAAAATTTTTAAACGTCTAAATGCTAAAGAATGGGGCATGGTTCTCCTTAGTACTGCCTTTATCTGTTTGGCTGT
CTGGATGGATTTGAAGACGCCCGAATATATGTCCAACATTACAACCTTGCTGCAGACTAAGGGAACGACCGCCTCAGATA
TTATGGATCCGGGATCTAAGATGCTCATGTTTTCATTTGGGAGCTTTTTTATGGCCGTTCTAGTTGGTTTTTTAGCTTCA
AGAACAGCTGCTAGCTTTACGACCCGTCTTCGATCTGATATTTTCAACCGAGTTATGGATTATTCAGAGGCGGAAATCAA
GAAATTTTCCATTCCCAGCCTTCTAACGCGTACGACTAATGATTTGACACAGTTGCAAATCATGATCGTTATGGGAATGC
AAGTGGTGACACGCGGTCCAATCATGGCTGTTTGGGCCTTGACTAAAATCTGGGGTAAAAGCGATGAATGGACAGGAGCA
GTCGGTGTTGCTGTTTTAATTGTCTTTATTATGCTGTCTGTTTTGATGTTTGTCGCTTTTCCAAGACAGCGTCAGGTGCA
GAGCTTGACGGATGCTCTAAATTCTACAACCCGTGAATCTCTGACTGGTGTTCGTGTTGTTCGGGCTTACAATGCAGAAG
ATTATCAGGACACTAAATTTAAGCGGGAAAATAAAAGCCTGACGAAATTGAATTTATTGGTCTATCGTCTGATGTCGCTA
ATGAATCCTGTCATGACAGTTGTTTCCAGTGGTCTAACTTTAGCTATTTATTGGATTGGAGCTTACCTGCTCAATGATAT
TAAAATTCCTATGACGAGTGTGACAGCTGCTAAAGGAGCTATTGCTGATCGTATCAGTGTTTTTAGTGATATGGTTGTCT
TTTCATCTTATGCCATGCAGGTTGTTGTCGGTTTTATGATGATGGTCGCTATCTTTATCATTTTACCGCGTGCTTTAGTT
TCTGCCAAACGAATTAATGAAGTATTGGCGCTTAACTCATCTGTACACTTCAAAGAATATTCTAAAGCAGACAATGCTCG
AAAAGGAGAAGTCGAATTTCATGATGTATCGTTTCGTTACAGTAAAAATTCTCGTGCGGTTATTGAGCATGTGTCTTTCA
GTGCTAAAGCTGGTGAGATAGTTGCTTTTATTGGCTCCACTGGCTCAGGAAAATCAACTCTTGTTAATCTGATTCCTCGT
TTTTATGATGCTACAGAAGGTTGGATTAAGATAGATGGCATCAAAGTGCAAAATTACAGCCATGATGACCTCAACAATAA
AGTCGGCTATATTCCGCAAAGGGCAGTGCTTTTTAGTGGGACCATTCGTTCTAATATTGCATTTGGGCAAAGCGATCAAG
CGCCGCTTGATGATGCTAAAATTTGGGAGGCTCTTGAATTAGCCCAAGCCAAAGATTTTGTTGAAGAAAAAGAAAAGGGA
CTTGATACTGAGGTAGCTCAAGGCGGTACCAACTTCTCTGGCGGTCAAAAGCAACGCTTAGCTATTGCCCGTGCACTTGC
ACGCAAACCAGAAATTCTTATTTTTGATGACTCCTTCTCAGCTCTTGATTATAAGACGGATCGCATTCTGCGAAATGATT
TGGCAAAGAAAACCAAAGAAATGACTAAGTTGATTGTAGCCCAACGTATTTCAACTATTATGGATGCTGATCATATTTTG
GTCTTAGATCAAGGAAAGGTTGTTGGTCAAGGAACACACAAGGAATTACTGGCTAATAACGATATTTATCAAGAAATTGC
TTATTCACAACTATCTAAGGAGGAGTTAGAAAATGGAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

99.333

100

0.993