Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   HB751_RS08020 Genome accession   NZ_CP050272
Coordinates   1640611..1641381 (-) Length   256 a.a.
NCBI ID   WP_002264637.1    Uniprot ID   -
Organism   Streptococcus mutans strain P6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1635611..1646381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB751_RS08000 (HB751_08000) ychF 1636016..1637131 (-) 1116 WP_019804602.1 redox-regulated ATPase YchF -
  HB751_RS08005 (HB751_08005) - 1637295..1637486 (-) 192 WP_002262646.1 DUF951 domain-containing protein -
  HB751_RS08010 (HB751_08010) dnaN 1637759..1638895 (-) 1137 WP_002269934.1 DNA polymerase III subunit beta -
  HB751_RS08015 (HB751_08015) dnaA 1639051..1640409 (-) 1359 WP_002262648.1 chromosomal replication initiator protein DnaA -
  HB751_RS08020 (HB751_08020) spo0J 1640611..1641381 (-) 771 WP_002264637.1 ParB/RepB/Spo0J family partition protein Regulator
  HB751_RS08025 (HB751_08025) htrA 1641859..1643067 (-) 1209 WP_002262650.1 S1C family serine protease Regulator
  HB751_RS08030 (HB751_08030) rlmH 1643273..1643752 (+) 480 WP_002267291.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HB751_RS08035 (HB751_08035) - 1644096..1644758 (+) 663 WP_002283821.1 YoaK family protein -

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 29506.19 Da        Isoelectric Point: 10.1578

>NTDB_id=431196 HB751_RS08020 WP_002264637.1 1640611..1641381(-) (spo0J) [Streptococcus mutans strain P6]
MTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVIIK
KISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQG
HARLLLSIEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKKPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLKI
SFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 771 bp        

>NTDB_id=431196 HB751_RS08020 WP_002264637.1 1640611..1641381(-) (spo0J) [Streptococcus mutans strain P6]
ATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAACTAA
AGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTTTTG
GCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATCAAA
AAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGAAGC
CAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGACCAT
ATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTGCACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAAGGA
CACGCACGACTTCTTTTAAGTATAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTTAAG
TGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAAAACCTTCAAAAGACATTTTTCTGGCAGAAA
AAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAAATT
TCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-196)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.609

100

0.996