Detailed information    

insolico Bioinformatically predicted

Overview

Name   comB/nlmE   Type   Regulator
Locus tag   HB751_RS06690 Genome accession   NZ_CP050272
Coordinates   1378355..1379257 (-) Length   300 a.a.
NCBI ID   WP_167311854.1    Uniprot ID   -
Organism   Streptococcus mutans strain P6     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1373355..1384257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB751_RS06680 (HB751_06680) ulaG 1374660..1375751 (-) 1092 WP_002263526.1 L-ascorbate 6-phosphate lactonase -
  HB751_RS06685 (HB751_06685) - 1376331..1377998 (-) 1668 WP_002263525.1 BglG family transcription antiterminator -
  HB751_RS06690 (HB751_06690) comB/nlmE 1378355..1379257 (-) 903 WP_167311854.1 HlyD family efflux transporter periplasmic adaptor subunit Regulator
  HB751_RS06695 (HB751_06695) comA/nlmT 1379271..1381553 (-) 2283 WP_002266017.1 peptide cleavage/export ABC transporter Regulator
  HB751_RS06700 (HB751_06700) - 1382817..1383095 (-) 279 WP_002264456.1 hypothetical protein -
  HB751_RS06705 (HB751_06705) - 1383333..1383542 (-) 210 WP_002263944.1 hypothetical protein -
  HB751_RS06710 (HB751_06710) - 1384027..1384188 (-) 162 WP_162470319.1 hypothetical protein -

Sequence

Protein


Download         Length: 300 a.a.        Molecular weight: 34115.51 Da        Isoelectric Point: 10.4518

>NTDB_id=431188 HB751_RS06690 WP_167311854.1 1378355..1379257(-) (comB/nlmE) [Streptococcus mutans strain P6]
MDPKFLQSAEFYRRRYHNFATLLIVPLVCLIIFLVIFLCFAKKEITVISTGEVAPTKVVDVIQSYSDSSIIKNNLDNNAA
VEKGDVLIEYSENASPNRQTEQKNIIKERQKREEKEKKKHQKSKKKKKSKSKKASKDKKKKSKDKESSSDDENETKKVSI
FASEDGIIHTNPKYNGANIIPKQTEIAQIYPDIQKTRKVLITYYASSDDVVSMKKGQTARLSLEKKGNDKVVIEGKINNV
ASSATTTKKGNLFKVTAKVKVSKKNSKLIKYGMTGKTVTVIDKKTYFDYFKDKLLHKMDN

Nucleotide


Download         Length: 903 bp        

>NTDB_id=431188 HB751_RS06690 WP_167311854.1 1378355..1379257(-) (comB/nlmE) [Streptococcus mutans strain P6]
ATGGATCCTAAATTTTTACAAAGTGCAGAATTTTATAGGAGACGCTATCATAATTTTGCGACACTATTAATTGTTCCTTT
GGTCTGCTTGATTATCTTCTTGGTCATATTCCTTTGTTTTGCTAAAAAAGAAATTACAGTGATTTCTACTGGTGAAGTTG
CACCAACAAAGGTTGTAGATGTTATCCAATCTTACAGTGACAGTTCAATCATTAAAAATAATTTAGATAATAATGCAGCT
GTTGAGAAGGGAGACGTTTTAATTGAATATTCAGAAAATGCCAGTCCAAACCGTCAGACTGAACAAAAGAATATTATAAA
AGAAAGACAAAAACGAGAAGAGAAGGAAAAGAAAAAACACCAAAAGAGCAAGAAAAAGAAGAAGTCTAAGAGCAAGAAAG
CTTCCAAAGATAAGAAAAAGAAATCGAAAGACAAGGAAAGCAGCTCTGACGATGAAAATGAGACAAAAAAGGTTTCGATT
TTTGCTTCAGAAGATGGTATTATTCATACCAATCCCAAATATAATGGTGCCAATATTATTCCGAAGCAAACCGAGATTGC
TCAAATCTATCCTGATATTCAAAAAACAAGAAAAGTGTTAATCACCTATTATGCTTCTTCTGATGATGTTGTTTCTATGA
AAAAGGGGCAAACCGCTCGTCTTTCCTTGGAAAAAAAGGGAAATGACAAGGTTGTTATTGAAGGAAAAATTAACAATGTC
GCTTCATCAGCAACTACTACTAAAAAAGGAAATCTCTTTAAGGTTACTGCCAAAGTAAAGGTTTCTAAGAAAAATAGCAA
ACTCATCAAGTATGGTATGACAGGCAAGACAGTCACTGTCATTGATAAAAAGACTTATTTTGATTATTTCAAAGATAAAT
TACTGCATAAAATGGATAATTAG

Domains

Predicted by InterproScan.

HlyD family secretion protein (HlyD_3)

(160-272)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comB/nlmE Streptococcus mutans UA159

99.667

100

0.997