Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   Y1U_RS04090 Genome accession   NC_017927
Coordinates   772524..773006 (+) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus MN-ZLW-002     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 767524..778006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Y1U_RS04070 (Y1U_C0782) queG 768397..769515 (+) 1119 WP_011226076.1 tRNA epoxyqueuosine(34) reductase QueG -
  Y1U_RS04075 (Y1U_C0783) prfB 769568..770666 (+) 1099 WP_148263167.1 peptide chain release factor 2 -
  Y1U_RS04080 (Y1U_C0784) ftsE 770754..771446 (+) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  Y1U_RS04085 (Y1U_C0785) ftsX 771439..772368 (+) 930 WP_011681194.1 permease-like cell division protein FtsX -
  Y1U_RS04090 (Y1U_C0786) mutX 772524..773006 (+) 483 WP_011226072.1 NUDIX hydrolase Machinery gene
  Y1U_RS04095 (Y1U_C0787) - 773017..774195 (+) 1179 WP_014621658.1 AI-2E family transporter -
  Y1U_RS04100 (Y1U_C0788) - 774185..775414 (+) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  Y1U_RS04105 (Y1U_C0789) lepB 775537..776094 (+) 558 WP_011681191.1 signal peptidase I -
  Y1U_RS04110 (Y1U_C0791) pepT 776302..777525 (+) 1224 WP_014727440.1 peptidase T -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=43118 Y1U_RS04090 WP_011226072.1 772524..773006(+) (mutX) [Streptococcus thermophilus MN-ZLW-002]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=43118 Y1U_RS04090 WP_011226072.1 772524..773006(+) (mutX) [Streptococcus thermophilus MN-ZLW-002]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706

Multiple sequence alignment