Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   HB753_RS07365 Genome accession   NZ_CP050270
Coordinates   1501537..1502262 (-) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans strain S4     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1496537..1507262
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB753_RS07330 (HB753_07330) rnpM 1496708..1497004 (-) 297 WP_002263922.1 RNase P modulator RnpM -
  HB753_RS07335 (HB753_07335) nusA 1497022..1498215 (-) 1194 WP_002262603.1 transcription termination factor NusA -
  HB753_RS07340 (HB753_07340) rimP 1498251..1498742 (-) 492 WP_002262604.1 ribosome maturation factor RimP -
  HB753_RS07350 (HB753_07350) trmB 1499014..1499649 (-) 636 WP_002265651.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  HB753_RS07355 (HB753_07355) ccrZ 1499659..1500441 (-) 783 WP_002262606.1 cell cycle regulator CcrZ -
  HB753_RS07360 (HB753_07360) pptB 1500500..1501534 (-) 1035 WP_002286148.1 ABC transporter permease Regulator
  HB753_RS07365 (HB753_07365) pptA 1501537..1502262 (-) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  HB753_RS07370 (HB753_07370) - 1502327..1502746 (+) 420 WP_002262609.1 HIT family protein -
  HB753_RS07375 (HB753_07375) - 1502743..1503036 (+) 294 WP_002265649.1 hypothetical protein -
  HB753_RS07380 (HB753_07380) brpA 1503206..1504426 (-) 1221 WP_002269512.1 biofilm formation/cell division transcriptional regulator BrpA -
  HB753_RS07385 (HB753_07385) tsaE 1504757..1505200 (-) 444 WP_002265162.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  HB753_RS07390 (HB753_07390) - 1505328..1506758 (-) 1431 WP_002310941.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=431069 HB753_RS07365 WP_002262608.1 1501537..1502262(-) (pptA) [Streptococcus mutans strain S4]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=431069 HB753_RS07365 WP_002262608.1 1501537..1502262(-) (pptA) [Streptococcus mutans strain S4]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACGCCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAGATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCCTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759