Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   Y1U_RS02520 Genome accession   NC_017927
Coordinates   467297..468103 (+) Length   268 a.a.
NCBI ID   WP_014727361.1    Uniprot ID   -
Organism   Streptococcus thermophilus MN-ZLW-002     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 462297..473103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Y1U_RS02500 (Y1U_C0469) tuf 463346..464542 (+) 1197 WP_002949971.1 elongation factor Tu -
  Y1U_RS02505 (Y1U_C0470) tpiA 464791..465549 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  Y1U_RS02510 (Y1U_C0471) tmk 465787..466416 (+) 630 WP_014608059.1 dTMP kinase -
  Y1U_RS02515 (Y1U_C0472) - 466425..467300 (+) 876 WP_014727360.1 DNA polymerase III subunit delta' -
  Y1U_RS02520 (Y1U_C0473) yaaT 467297..468103 (+) 807 WP_014727361.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  Y1U_RS02525 (Y1U_C0474) yabA 468090..468410 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  Y1U_RS02530 (Y1U_C0475) rsmI 468413..469279 (+) 867 WP_014608062.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  Y1U_RS02535 (Y1U_C0476) - 469416..470651 (+) 1236 WP_024704224.1 ammonium transporter -
  Y1U_RS02540 (Y1U_C0477) - 470662..471003 (+) 342 WP_011680840.1 P-II family nitrogen regulator -
  Y1U_RS02545 (Y1U_C0478) - 471101..471757 (+) 657 WP_011680841.1 glycoside hydrolase family 73 protein -
  Y1U_RS02550 (Y1U_C0479) - 471780..472601 (+) 822 WP_011680842.1 Cof-type HAD-IIB family hydrolase -
  Y1U_RS11330 - 472620..473090 (-) 471 Protein_448 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29813.24 Da        Isoelectric Point: 4.6447

>NTDB_id=43103 Y1U_RS02520 WP_014727361.1 467297..468103(+) (yaaT) [Streptococcus thermophilus MN-ZLW-002]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMRVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQGLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFDKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=43103 Y1U_RS02520 WP_014727361.1 467297..468103(+) (yaaT) [Streptococcus thermophilus MN-ZLW-002]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTCTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCCGTGGATTTGAATAGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGAGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAGGTTTATC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGACAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414

Multiple sequence alignment