Detailed information NTG0431001

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: HBA18_RS08810
• Genome accession: NZ_CP050266
• Coordinates: 1848639..1852040 (+)
• Length: 1133 a.a.
• NCBI ID: WP_167314591.1
• Uniprot ID: -
• Organism: Salinivibrio costicola strain M318
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1843639..1857040

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HBA18_RS08800 (HBA18_08800)	rluC	1843965..1844918 (-)	954	WP_167314590.1	23S rRNA pseudouridine(955/2504/2580) synthase RluC	-
HBA18_RS08805 (HBA18_08805)	rne	1845485..1848400 (+)	2916	WP_244323487.1	ribonuclease E	-
HBA18_RS08810 (HBA18_08810)	chiS	1848639..1852040 (+)	3402	WP_167314591.1	response regulator	Regulator
HBA18_RS08815 (HBA18_08815)	-	1853011..1854699 (+)	1689	WP_167314592.1	ABC transporter substrate-binding protein	-
HBA18_RS08820 (HBA18_08820)	-	1854783..1855769 (+)	987	WP_077579530.1	ABC transporter permease	-
HBA18_RS08825 (HBA18_08825)	-	1855771..1856799 (+)	1029	WP_046075427.1	ABC transporter permease	-

Sequence

Protein

• Length: 1133 a.a.
• Molecular weight: 126638.74 Da
• Isoelectric Point: 6.4287

>NTDB_id=431001 HBA18_RS08810 WP_167314591.1 1848639..1852040(+) (chiS) [Salinivibrio costicola strain M318]
MRKLFIAPPFKRLHHTLMLAFLLLSLLPLILVALFFLNAHSKDLQEQSTAHLLSVRDSKQQQVRDYFDAKESEVLGFVAS
ELAYASGGHFYGLVNAFRSLGPDIDSARQYAQTRYHPGSGHAIKTPVSKGSPNYPGVERYRLLHKRYHRAYLALLARADF
DDLLLVDKQGNVTYSVKKHSNYGTNLLTGPYQDSELGHTFAALKRQDRQVKGKRDPHPNVVMSDFAQDPDGNAYAWLGAP
IIQQGYLHSYALFRLPNHALTALMSPSSSSDIQTLLVGDDLQVRGHSSTPETIANSLAVIEKALGNHTGVERYDNASGDT
MLAAFAPISTHGLHWALVAEVPIDIAFARVRQLEQLFIVAMLLAGFAVVAASNSMSSFITRPLLQLTWAAEKVSAGDLDT
KIHHTRRHDEIGRLAVSFSRMRRAIREKLQLINQQNQTLEQSLATIQEQNQELQLANKLKDEFLATTSHELRTPLHGMIG
IADALIAGANGPISRDHQYQLSIIVNSGQRLAKLVDDLLDYHKMRYGQLSLESEAIDITSLARLVLSLAEHLKKDKPIRI
INQLPSSSLWVCADTQRLEQVMYNLIGNAVKFTDAGKIVLSAEKIDDRVRIQLVDTGQGIPPEQLNVIFEPLTQAVSDHY
HYQHGAGLGLSITRQLIELMGGQLYVSSQPQIGTTFSFTLPAVEAPDEPVVHLPNDEQPSPLWQPFNPQDVENKTNATTT
TCDDGLLILVVDDEPTNQQVLTSFLQMEGYQVITASDGETALQQVEKERPALVLLDILMPGISGFEVCERLRQQYHHGEL
PIIMLTALNQPDDRIHGFNVGANDYLSKPFNKQELAARIATHLAACDAERRQQENQRLEAALAQSAERQASLLETQSWLI
SQLSLAPEAIIGAGSDGQIRFANASAAALFQQQDANLKRMHSHALIHEPDESQQLERYQGKLTVYIGDQHRDLEGMILRF
PAASEITTLYVMNTDTPVSLARIQSLESAIEALSGYAFRGDARQLDKLKAMGGEFEALVSQAQSQQEDKAQARRQLIVDA
MVAGLEYWEKTTGKSKFDFAEQSGLWRVYLDRSSLQTRTLDKYLLLETLPKTPRWRTVLSSIRYILDHCDKHNTDRTQLE
TYYRQLRQLLLED

Nucleotide

• Length: 3402 bp

>NTDB_id=431001 HBA18_RS08810 WP_167314591.1 1848639..1852040(+) (chiS) [Salinivibrio costicola strain M318]
ATGAGAAAGCTGTTTATCGCTCCCCCGTTTAAGCGCCTTCATCACACCTTGATGTTGGCTTTTCTCCTGCTGAGCTTATT
GCCTCTGATTCTCGTGGCACTTTTTTTTCTTAATGCTCACAGCAAGGATTTGCAGGAGCAAAGCACCGCACACTTACTTT
CTGTACGCGATAGCAAACAACAACAAGTGCGTGATTACTTTGATGCTAAAGAATCTGAAGTGTTAGGGTTCGTCGCATCA
GAGCTCGCCTATGCCAGCGGCGGTCACTTTTATGGCTTAGTGAATGCCTTCCGCAGCCTAGGCCCTGATATTGATTCCGC
CCGGCAGTATGCACAGACTCGCTACCATCCCGGTTCAGGTCACGCGATAAAAACGCCCGTTAGCAAAGGCTCGCCGAATT
ACCCCGGTGTAGAACGTTACCGCTTACTGCACAAACGTTATCATCGCGCCTATTTGGCACTATTGGCACGCGCAGACTTT
GACGATCTGCTACTCGTCGATAAACAAGGTAATGTCACCTATTCAGTCAAAAAGCATTCGAACTATGGGACCAATTTATT
GACGGGCCCTTACCAAGATAGCGAGCTGGGTCACACCTTTGCCGCGCTAAAGCGCCAAGATAGGCAGGTGAAAGGTAAAC
GCGACCCTCACCCTAATGTCGTCATGTCAGACTTTGCCCAAGATCCGGATGGCAACGCCTATGCATGGCTCGGCGCTCCC
ATTATTCAGCAAGGCTACCTGCACAGTTATGCCTTGTTTCGGCTTCCCAATCACGCGCTGACCGCGTTAATGAGCCCTTC
ATCTTCATCCGACATTCAAACCTTGTTAGTCGGAGACGATCTGCAAGTGCGCGGCCATTCATCTACCCCAGAGACGATCG
CCAACAGCCTAGCAGTGATTGAAAAGGCACTGGGCAATCACACAGGGGTTGAACGCTATGACAATGCATCCGGCGACACC
ATGCTGGCGGCCTTTGCGCCTATCTCGACCCATGGCTTGCATTGGGCGCTTGTCGCCGAAGTGCCAATCGACATTGCGTT
TGCGAGAGTTCGTCAACTCGAACAGCTGTTTATTGTTGCGATGCTGTTGGCTGGCTTTGCCGTGGTGGCTGCATCGAACA
GTATGTCGAGCTTTATTACTCGCCCTTTGTTGCAGCTGACATGGGCCGCAGAGAAAGTGAGTGCGGGCGATCTAGATACT
AAAATTCATCACACGCGTCGGCATGATGAAATCGGGCGTTTGGCGGTCAGCTTTTCTCGTATGCGGCGCGCTATCCGTGA
GAAGCTTCAGCTTATCAACCAGCAAAATCAAACACTTGAGCAAAGCTTGGCGACGATTCAAGAGCAAAACCAAGAGTTGC
AGTTGGCTAACAAGCTCAAAGACGAGTTTCTAGCTACCACTTCGCATGAGTTGCGCACGCCTTTGCATGGCATGATTGGG
ATTGCCGACGCCTTGATTGCTGGTGCGAATGGTCCAATTAGTCGTGATCATCAGTATCAACTTTCGATCATTGTCAACAG
CGGCCAACGGTTGGCAAAATTAGTCGATGATCTGCTCGATTATCATAAAATGCGTTATGGCCAGCTCTCGCTTGAAAGCG
AAGCGATCGATATCACCAGCCTAGCGCGTCTTGTCCTTTCTTTGGCTGAACATCTCAAAAAAGATAAGCCAATCCGTATC
ATCAATCAGCTCCCCTCGTCCTCTTTGTGGGTCTGTGCCGATACCCAACGCCTTGAGCAAGTGATGTATAACCTGATTGG
TAATGCAGTGAAGTTTACTGATGCCGGTAAGATAGTGTTGAGTGCCGAAAAAATTGATGACAGGGTTCGCATTCAGTTAG
TCGATACCGGGCAAGGGATCCCGCCCGAGCAACTGAACGTGATCTTTGAGCCACTCACTCAAGCGGTCAGCGATCACTAC
CACTATCAGCATGGTGCCGGGCTGGGCTTGTCGATCACACGTCAGCTGATTGAGCTTATGGGCGGTCAGCTTTATGTAAG
CAGTCAGCCACAAATAGGTACCACATTTAGTTTTACCCTACCCGCGGTCGAAGCGCCTGACGAACCGGTTGTTCATTTAC
CCAATGACGAACAGCCTTCTCCCCTCTGGCAACCCTTTAACCCACAGGACGTCGAGAATAAGACGAACGCAACCACCACC
ACTTGCGATGATGGCTTACTGATCTTGGTGGTTGATGACGAACCCACCAATCAACAAGTATTAACCAGCTTTTTGCAAAT
GGAGGGTTATCAGGTTATTACCGCTAGCGATGGCGAAACGGCGCTACAACAGGTCGAAAAAGAACGTCCTGCGCTGGTAT
TGCTCGATATACTCATGCCCGGGATAAGTGGCTTTGAAGTCTGTGAGCGATTACGCCAGCAGTATCATCATGGGGAGCTT
CCCATCATCATGCTCACTGCCCTTAATCAACCTGATGATCGCATTCATGGTTTTAACGTGGGTGCTAATGACTATTTGAG
TAAACCGTTCAATAAGCAAGAACTTGCCGCTCGTATTGCCACGCATCTTGCCGCCTGTGATGCCGAGCGACGTCAGCAAG
AAAATCAGCGATTGGAAGCCGCATTAGCGCAAAGTGCAGAGCGACAGGCGAGTCTACTCGAAACCCAGTCATGGCTGATT
TCACAATTATCCCTCGCCCCTGAAGCGATCATCGGGGCAGGCAGCGATGGTCAAATCCGGTTTGCCAATGCATCTGCCGC
TGCGTTATTTCAACAGCAAGATGCCAATCTCAAGCGTATGCATAGTCATGCCCTGATCCACGAGCCGGATGAGAGCCAAC
AGCTCGAACGCTATCAAGGTAAGTTGACTGTTTATATCGGCGACCAGCATCGTGATCTAGAAGGCATGATTTTGCGTTTC
CCGGCGGCTTCTGAGATAACCACCTTATATGTGATGAACACTGATACGCCCGTCTCGCTAGCGCGGATCCAAAGTTTAGA
AAGTGCGATTGAGGCTTTGTCTGGCTATGCATTCCGCGGTGATGCGCGCCAACTGGATAAATTAAAAGCCATGGGCGGTG
AGTTTGAAGCCTTAGTGAGCCAAGCCCAGAGCCAGCAAGAGGATAAAGCGCAAGCACGCCGACAACTCATTGTCGATGCG
ATGGTGGCTGGACTCGAATACTGGGAAAAAACGACGGGCAAAAGTAAGTTCGATTTTGCCGAACAAAGCGGGCTTTGGCG
GGTCTACCTCGACCGCAGTAGCCTACAAACCCGCACATTGGATAAGTACTTACTGCTGGAAACCTTACCCAAAACACCAA
GGTGGCGCACAGTACTCAGCTCTATTCGCTATATTCTTGACCACTGTGACAAACACAATACCGATCGTACCCAGTTAGAA
ACCTACTACCGACAGCTGCGTCAGCTGCTGCTCGAAGACTAA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (728-839)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• HAMP domain (HAMP) (377-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	58.414	100	0.585