Detailed information NTG0043092

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: VEJY3_RS12820
• Genome accession: NC_016613
• Coordinates: 2848497..2851883 (+)
• Length: 1128 a.a.
• NCBI ID: WP_014232908.1
• Uniprot ID: -
• Organism: Vibrio sp. EJY3
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2843497..2856883

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VEJY3_RS12800 (VEJY3_12785)	erpA	2843864..2844205 (-)	342	WP_014232903.1	iron-sulfur cluster insertion protein ErpA	-
VEJY3_RS12805 (VEJY3_12790)	hemL	2844448..2845743 (+)	1296	WP_014232904.1	glutamate-1-semialdehyde 2,1-aminomutase	-
VEJY3_RS12810 (VEJY3_12800)	-	2846083..2847168 (+)	1086	WP_014232906.1	AI-2E family transporter	-
VEJY3_RS12815 (VEJY3_12805)	rsmC	2847245..2848270 (+)	1026	WP_014232907.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
VEJY3_RS24835	-	2848244..2848498 (-)	255	WP_231113027.1	hypothetical protein	-
VEJY3_RS12820 (VEJY3_12810)	chiS	2848497..2851883 (+)	3387	WP_014232908.1	response regulator	Regulator
VEJY3_RS12825 (VEJY3_12815)	-	2852759..2854441 (+)	1683	WP_014232909.1	ABC transporter substrate-binding protein	-
VEJY3_RS12830 (VEJY3_12820)	-	2854613..2855599 (+)	987	WP_014232910.1	ABC transporter permease	-
VEJY3_RS12835 (VEJY3_12825)	-	2855602..2856627 (+)	1026	WP_014232911.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127451.07 Da
• Isoelectric Point: 5.5126

>NTDB_id=43092 VEJY3_RS12820 WP_014232908.1 2848497..2851883(+) (chiS) [Vibrio sp. EJY3]
MFKFYKKQKFKRLQSTLMTAFLVLSLTPLTITALFFLQSHSQDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRQNAQQRYIEGSGDQTKTSILPESSNFVGSERYRLLHKRYHWAYSELLKRSDF
NDILLVDINGNVTYSIKKDDNYGTNLLTGRYKDAALGRAFQRLANDVSERRKVNEDYTPILISDFELENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLVADKNRESSIETLLVGGDQQPRTINTKLDDIQNSMEVITQALSGQTSVGTYTNGLDEA
IIAAYAPVKTRGVNWALVVQLPEKDAFSRIHQLEKLFVIAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
NTFDTVRKDEIGRLAISFERMQRSIREKIQTIKKQNEELESNIRLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLISGANGTIPANQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVNLASSTRLVLELSSHLLGNKTIRI
INQVPNDLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISAGVVDDLVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDES
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEILATQTQATCGHFQAPEVNLENTEDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCNELRQTFDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIRAHLTASKAEMRHIENKVLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRVRFANEAACKLFKRSLEQIKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANTARIHNLETAVEVLSRYAFDGDKEQLQKLKELGGEFTRLADKALGNKKDKQEVMREVLVEAMTHA
LEYWESVTGESKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=43092 VEJY3_RS12820 WP_014232908.1 2848497..2851883(+) (chiS) [Vibrio sp. EJY3]
ATGTTCAAATTCTACAAAAAACAGAAGTTTAAGCGTCTACAAAGTACGCTGATGACTGCGTTTCTTGTCCTCAGCCTTAC
GCCTCTAACCATTACCGCGCTTTTTTTCCTGCAGTCACACAGTCAAGATCTGCAAGAACAGAGCACGTCGCACCTGCTGT
CTGTACGAGATACCAAACAGCAGCAAATTATTGACTATTTTGAAGCACGCGAAACCGAAGTAATGGGCTTTGTCCGTTCG
GAGTTAGCTTATGCCAGCGGTGGACGCTTTTATGGTTTAGTCAATGCGTTCAGTCGCTTAGGAAACGACATTGAAGAGTC
ACGTCAAAATGCACAGCAACGTTATATTGAAGGCAGTGGCGATCAGACAAAAACGTCAATCTTGCCGGAGTCATCTAACT
TTGTCGGGAGCGAGCGTTATCGCCTGTTACACAAGCGCTATCATTGGGCTTATTCAGAACTTCTAAAACGCTCTGACTTC
AATGACATACTTTTAGTCGATATCAACGGTAACGTTACTTACTCAATCAAAAAAGACGACAATTACGGCACTAATCTTCT
CACTGGCCGCTATAAAGATGCTGCGCTAGGTAGAGCGTTTCAGCGCTTGGCCAATGATGTCAGCGAGCGCCGTAAAGTAA
ACGAAGACTACACTCCAATCCTTATCTCTGACTTTGAACTTGAAAATGGCAAGCAAGTCGCGTGGCTTGGCGCTCCTATC
GTTCAACAAGGATATCTCCATAGCTATGCCATGTTCCGATTGCCAAATAACGGCATCACAAAGCTAGTCGCAGACAAAAA
CCGCGAGTCATCGATTGAGACGCTATTAGTCGGAGGAGATCAACAACCTCGAACCATTAACACCAAGCTAGATGATATCC
AAAACAGTATGGAGGTCATCACTCAGGCACTTTCAGGTCAAACGAGCGTAGGTACTTATACAAACGGGCTCGATGAAGCC
ATTATCGCCGCCTATGCGCCAGTTAAAACCCGTGGTGTTAATTGGGCGTTGGTCGTGCAGTTACCAGAAAAAGACGCCTT
TTCTCGCATTCACCAGCTGGAAAAACTCTTCGTCATTGCGATGCTTACGGCGATCATACTGGTTGTAATTGCCTCGCACT
ATTTATCGAATTTCATCACCTCGCCACTGCTTAAATTAACCTGGGCGGCAGAGCGAGTATCAGCAGGCGATCTGGACGAA
AACACATTTGATACCGTTAGAAAAGACGAAATTGGTCGCTTAGCCATCAGTTTTGAGCGCATGCAACGTTCCATTCGTGA
AAAAATTCAGACGATCAAGAAGCAAAATGAAGAGCTGGAAAGCAACATCCGCTTAATTCAAAAACAAAATGACGAGCTGC
AACTGGCAGACAAGCTAAAAGATGAGTTTCTGGCAACGACCTCTCATGAACTGCGTACGCCTTTGCACGGCATGGTCGGT
ATTGCAGAAACCTTGATATCCGGAGCCAACGGTACAATTCCGGCAAACCAGAAGTATCAGCTCGATATAATTATTAAAAG
TGGCCAACGTTTGGCTAACCTGGTCGACGACTTACTGGATTACCATAAAATGCGATACGGTAGCATGGACATCCAGAAGT
CGGCTGTTAACCTGGCAAGTTCAACCCGATTGGTGCTGGAATTGTCGAGTCATTTACTTGGAAACAAGACTATTCGAATC
ATCAATCAAGTACCTAATGATCTCAAAGCAGTCTCAGCGGACCCACAACGACTTGAACAGGTGCTTTACAATCTGATAGG
AAACGCAATTAAGTACACCTCTGAAGGTAAGATCGTTATTTCTGCAGGAGTCGTAGACGATTTAGTTCGCGTTCAAGTGG
TCGACACCGGACAAGGTATTCCTGCTGAGCACCTTGAGCACATCTTTGAGCCTTTAATTCAGGCAGGACAGGATGAAAGT
CGCTATCGTCAAGGTGCGGGGTTAGGTTTATCAATTAGCCGCCAGTTGATTGAGCTAATGGGTGGCTCCTTATATGTCAG
CAGCCAACCTATGGTAGGGACCACATTCAGCTTCACTCTGCCTCTCGCCAGTGAAGAAGAGATCCTAGCAACACAGACGC
AGGCAACCTGTGGGCACTTCCAGGCTCCAGAAGTTAACCTTGAGAACACAGAAGACCTATCGCTACCAGAAAACCCAGAT
GGTCCGCTACTTTATGTAGCAGACGATGAACCAGTCAACCTACGAGTACTTGAAAGCTTTTTACGCTTAGAAGGCTATCG
TGTAAGAACCGTTTCAGATGGCCCTGAAACACTTGCTCTTGTCGAGCAAGAAAAGCCGGAACTTCTGCTGCTCGATATCA
TGATGCCAGGAATGAGTGGCTATCAAGTATGTAATGAATTGCGTCAAACCTTTGATCATGCTGAGCTGCCAATCATTATG
CTAACCGCCTTAAGTCAAACTGAGGACCGAGTTAGAGGCTTTGAAGCCGGAGCAAACGATTATTTGTCGAAGCCTTTTAA
CAAACAAGAGCTTGCAGCCAGAATTAGAGCTCATTTGACCGCAAGTAAAGCAGAGATGCGTCATATTGAGAATAAAGTAC
TTGAGTCGGAACTTCGTCAACGAGCTGAAGTAGAAGCGAGCTTGCTTGAAACTCAGGGGCGTCTGCTAGAGCAGCTTGAG
TCCGCTCCTGAGGCGATTATTTGCTTGCGCGAAGATCAACGTGTTCGTTTTGCCAACGAAGCCGCATGTAAGCTGTTTAA
ACGTAGCTTAGAGCAAATTAAACGTTCGTCTGCCGATGAGCTGATTGCTCCAAAATTTCTGACCGTTAAGCAGCCACATT
ATTGCGGGAAAATTGATATTTATATCGAGGACATTCGCCAAAATATTGAAGCGGACATCCTTAAGCTTCCAGAAGGTTCC
GGCCTAGACGTTATGTACATATTTAATGTCGGTGGAGGCGCAAATACAGCGCGCATTCACAACCTGGAAACGGCAGTGGA
GGTACTTTCTCGCTATGCCTTTGACGGCGACAAAGAACAGCTACAGAAGCTTAAAGAGCTTGGAGGCGAATTCACTCGAC
TGGCAGACAAAGCATTAGGCAATAAAAAAGACAAACAGGAAGTTATGCGTGAAGTACTGGTCGAAGCGATGACACATGCT
TTGGAATACTGGGAGTCTGTCACTGGAGAAAGTAAGTTTACCTTTGCCGAGCAAAGTGGTCTTTGGCGCGTTTACCTTGA
TAGAAGTACGCTACAAACCCGTACTCTAGATAAATACATGCGCATTGAAACCTTACCTAAAACTCCACGCTGGAGAACGG
TTTTAAGCTCTATCGAGTTCATCCTTGAGCACTGTAAAGAACAAAGTCCGGAGCGTGCTTATATTGAAGCGCAGCGTGAC
AAGCTGCAAAGGTTACTTACCAGCTAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.819	100	0.759