Detailed information NTG0043077

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: VEJY3_RS01300
• Genome accession: NC_016613
• Coordinates: 285147..286154 (-)
• Length: 335 a.a.
• NCBI ID: WP_014230660.1
• Uniprot ID: -
• Organism: Vibrio sp. EJY3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 280147..291154

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VEJY3_RS01270 (VEJY3_01230)	zapB	280272..280514 (+)	243	WP_014230654.1	cell division protein ZapB	-
VEJY3_RS01275 (VEJY3_01235)	rraA	280588..281130 (-)	543	WP_014230655.1	ribonuclease E activity regulator RraA	-
VEJY3_RS01280 (VEJY3_01240)	-	281207..282124 (-)	918	WP_014230656.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
VEJY3_RS01285 (VEJY3_01245)	hslU	282380..283711 (-)	1332	WP_014230657.1	HslU--HslV peptidase ATPase subunit	-
VEJY3_RS01290 (VEJY3_01250)	hslV	283735..284286 (-)	552	WP_014230658.1	ATP-dependent protease subunit HslV	-
VEJY3_RS01295 (VEJY3_01255)	-	284440..284985 (-)	546	WP_014230659.1	SPOR domain-containing protein	-
VEJY3_RS01300 (VEJY3_01260)	cytR	285147..286154 (-)	1008	WP_014230660.1	DNA-binding transcriptional regulator CytR	Regulator
VEJY3_RS01305 (VEJY3_01265)	priA	286490..288694 (-)	2205	WP_014230661.1	primosomal protein N'	-
VEJY3_RS01310 (VEJY3_01270)	rpmE	288992..289213 (+)	222	WP_014230662.1	50S ribosomal protein L31	-
VEJY3_RS01315 (VEJY3_01275)	rpsJ	289672..289983 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
VEJY3_RS01320 (VEJY3_01280)	rplC	289998..290627 (+)	630	WP_014230663.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.30 Da
• Isoelectric Point: 6.2447

>NTDB_id=43077 VEJY3_RS01300 WP_014230660.1 285147..286154(-) (cytR) [Vibrio sp. EJY3]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGINKDPQYSIVTEFSFDGGAKAVRKLLELAEPPTA
IFCHCDTMAIGAIQEAKKLGFRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TNLIVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=43077 VEJY3_RS01300 WP_014230660.1 285147..286154(-) (cytR) [Vibrio sp. EJY3]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTATCTACCGCGACGGTATCTCGAGCATTAATGAATCCGGAGAA
AGTCTCCTCTTCAACCAGAAAAAGAGTTGAAGACGCGGTACTCGAAGCAGGTTACTCACCAAATTCATTAGCGCGTAATT
TACGACGAAACGAATCGAAGACGATTGTTACGATCGTTCCTGACATCTGCGACCCTTACTTTTCCGAAATCATCCGTGGT
ATCGAAGATGCAGCGATGGAGCACGGCTACCTGGTTTTACTGGGAGACAGTGGCCAGCAGAAGAAACGCGAAAGCTCATT
CGTAAACCTGGTATTTACAAAGCAAGCAGACGGGATGCTGCTACTTGGTACTGACTTACCGTTTGATGTGAGTAAGCCAG
AGCAGAAAAACCTGCCACCAATGGTCATGGCGTGTGAATTTGCGCCTGAGCTGGAACTGCCAACCGTTCATATCGATAAC
CTGACATCTGCCTTTGAAGCGGTCAATTATCTGACTCAGCTTGGCCACAAACGTATTGCGCAAATTTCAGGTCCTGATAC
CGCGGTATTGTGCCAATTCCGTCAACAAGGCTACCAGCAAGCGCTGCGTCGTGCAGGGATCAATAAAGACCCGCAATACA
GTATTGTCACCGAGTTCTCTTTTGACGGCGGTGCAAAAGCAGTGCGTAAGCTGCTGGAACTAGCGGAACCACCAACCGCA
ATTTTCTGCCACTGTGACACGATGGCAATCGGCGCCATTCAAGAAGCGAAAAAACTCGGCTTCCGTGTACCACAAGATCT
ATCGGTCGTAGGTTTTGATGACATCAATTTCGCGCAGTACTGTGATCCACCGTTAACAACTATCTCTCAGCCTCGCTACG
AGATTGGCCGACAAGCGATGCTAATGATGTTAGAGCTTTTAAAAGGCCACGATGTGCATTCTGGTTCTCGTCTCCTGGAG
ACTAACCTGATTGTGCGCGGAAGTGCGGCGCCTCCTCAACGAGCGTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	97.612	100	0.976
cytR	Vibrio cholerae C6706	89.222	99.701	0.89