Detailed information NTG0430646

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: HBA75_RS26930
• Genome accession: NZ_CP050183
• Coordinates: 5246638..5247987 (-)
• Length: 449 a.a.
• NCBI ID: WP_086412813.1
• Uniprot ID: -
• Organism: Bacillus thuringiensis strain HER1410
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5241638..5252987

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HBA75_RS26910 (HBA75_26935)	secA	5241964..5244471 (-)	2508	WP_000579387.1	preprotein translocase subunit SecA	-
HBA75_RS26915 (HBA75_26940)	raiA	5244745..5245287 (-)	543	WP_086412815.1	ribosome-associated translation inhibitor RaiA	-
HBA75_RS26920 (HBA75_26945)	cspC	5245610..5245807 (-)	198	WP_001990088.1	cold shock protein CspC	-
HBA75_RS26925 (HBA75_26950)	-	5245934..5246638 (-)	705	WP_086412814.1	ComF family protein	-
HBA75_RS26930 (HBA75_26955)	comFA	5246638..5247987 (-)	1350	WP_086412813.1	ATP-dependent helicase ComFA	Machinery gene
HBA75_RS26935 (HBA75_26960)	-	5248114..5249559 (-)	1446	WP_140159432.1	C40 family peptidase	-
HBA75_RS26940 (HBA75_26965)	-	5249708..5250022 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
HBA75_RS26945 (HBA75_26970)	-	5250195..5251037 (-)	843	WP_000684725.1	DegV family protein	-
HBA75_RS26950 (HBA75_26975)	-	5251274..5251909 (+)	636	WP_086412812.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51155.06 Da
• Isoelectric Point: 10.0028

>NTDB_id=430646 HBA75_RS26930 WP_086412813.1 5246638..5247987(-) (comFA) [Bacillus thuringiensis strain HER1410]
MVAGKQLLLDELSSDLQRELNDLKKKGEVVCVQGVKKKASKYVCQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECALLVRGIAERKREKNLNLLRWSGTLSTGQNLAAQGVIEAIKRKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVMVVDEIDAFPYCADQMLQYAVKQAM
KERAAHIYLTATPDETWKRKFRRGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKKQGMID

Nucleotide

• Length: 1350 bp

>NTDB_id=430646 HBA75_RS26930 WP_086412813.1 5246638..5247987(-) (comFA) [Bacillus thuringiensis strain HER1410]
ATGGTAGCGGGGAAACAGTTGCTATTAGACGAACTTTCTTCAGATTTACAGAGGGAATTAAATGATTTGAAAAAGAAGGG
AGAGGTCGTCTGTGTACAAGGTGTAAAAAAGAAGGCTTCTAAATATGTATGTCAGCGCTGTGGAAATATAGAACAGCGGC
TATTTGCGTCGTTTTTATGTAAAAGATGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGGGTAAGT
GAATGTGCTTTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTTAAACTTGTTACGGTGGAGCGGAACGTT
GTCTACTGGTCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCGAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCGAGAACGGATGTTGTTCTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTGGATAAAGAAAAAGATGCAGTACTAGTCGTTGCAACCACGCATCAATTATTGCGTTATTATAGGGCGTTTC
ATGTCATGGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAGAGCGGCGCATATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAGAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGAGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAAAACAAGGAATGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (108-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.584	98.441	0.508