Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   HBA48_RS05610 Genome accession   NZ_CP050135
Coordinates   1069624..1070076 (+) Length   150 a.a.
NCBI ID   WP_003787023.1    Uniprot ID   A0AAX2J405
Organism   Kingella kingae strain ATCC 23331     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1064624..1075076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA48_RS05585 (HBA48_05615) - 1064944..1066101 (+) 1158 WP_003790548.1 glycerate kinase -
  HBA48_RS05590 (HBA48_05620) dapE 1066138..1067262 (+) 1125 WP_003790550.1 succinyl-diaminopimelate desuccinylase -
  HBA48_RS05595 (HBA48_05625) - 1067329..1067688 (-) 360 WP_003787016.1 Mth938-like domain-containing protein -
  HBA48_RS05600 (HBA48_05630) - 1067788..1069095 (+) 1308 WP_003787017.1 homoserine dehydrogenase -
  HBA48_RS05605 (HBA48_05635) - 1069088..1069567 (+) 480 WP_003787019.1 hypothetical protein -
  HBA48_RS05610 (HBA48_05640) recX 1069624..1070076 (+) 453 WP_003787023.1 recombination regulator RecX Regulator
  HBA48_RS05615 (HBA48_05645) - 1070322..1070762 (+) 441 WP_003790554.1 CZB domain-containing protein -
  HBA48_RS05620 (HBA48_05650) lon 1071065..1073491 (+) 2427 WP_166503233.1 endopeptidase La -
  HBA48_RS05625 (HBA48_05655) - 1073681..1073983 (+) 303 WP_003790557.1 HU family DNA-binding protein -
  HBA48_RS05630 (HBA48_05660) - 1074040..1074645 (-) 606 WP_038303458.1 hypothetical protein -

Sequence

Protein


Download         Length: 150 a.a.        Molecular weight: 17520.83 Da        Isoelectric Point: 9.8887

>NTDB_id=430262 HBA48_RS05610 WP_003787023.1 1069624..1070076(+) (recX) [Kingella kingae strain ATCC 23331]
MKTEKSLRARAMEMMSRREMSQAELRAKLLPHANDSDELDAVLAEFAKNNWQSDERFAEAFVRSKSSKHGAGRLRQELRQ
RGVSAELIQQYLPDRETELDNAIEVARKKFKQPAQNRQEWDKQMRFMLYRGFAMATAQAALKRAWADDEE

Nucleotide


Download         Length: 453 bp        

>NTDB_id=430262 HBA48_RS05610 WP_003787023.1 1069624..1070076(+) (recX) [Kingella kingae strain ATCC 23331]
ATGAAAACCGAAAAATCACTCCGCGCCCGAGCGATGGAAATGATGTCGCGCCGTGAAATGAGCCAAGCCGAATTACGCGC
TAAATTGTTGCCCCACGCCAACGATAGCGATGAATTGGACGCGGTGTTGGCAGAATTTGCGAAAAACAACTGGCAATCGG
ACGAGCGATTTGCAGAAGCGTTTGTTCGCAGCAAAAGCAGTAAACACGGCGCAGGACGTTTGCGCCAAGAATTGCGACAA
CGCGGCGTATCGGCAGAATTGATTCAGCAATATTTGCCCGACCGCGAAACAGAATTGGATAACGCAATAGAAGTCGCCCG
CAAAAAATTCAAGCAGCCTGCACAAAATCGGCAGGAATGGGACAAGCAAATGCGTTTTATGTTGTATCGCGGTTTTGCAA
TGGCAACGGCGCAGGCTGCTTTGAAACGCGCTTGGGCAGACGATGAAGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(34-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

54.667

100

0.547