Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   HBA50_RS07345 Genome accession   NZ_CP050133
Coordinates   1476948..1478015 (-) Length   355 a.a.
NCBI ID   WP_037586341.1    Uniprot ID   -
Organism   Streptococcus cristatus ATCC 51100     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1471948..1483015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA50_RS07325 (HBA50_07325) trpB 1473049..1474230 (-) 1182 WP_045499042.1 tryptophan synthase subunit beta -
  HBA50_RS07330 (HBA50_07330) - 1474598..1475137 (-) 540 WP_045499040.1 VanZ family protein -
  HBA50_RS07335 (HBA50_07335) rlmN 1475124..1476212 (-) 1089 WP_045499038.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  HBA50_RS07340 (HBA50_07340) - 1476222..1476785 (-) 564 WP_045499035.1 YutD family protein -
  HBA50_RS07345 (HBA50_07345) sepM 1476948..1478015 (-) 1068 WP_037586341.1 SepM family pheromone-processing serine protease Regulator
  HBA50_RS07350 (HBA50_07350) coaD 1478038..1478523 (-) 486 WP_045499033.1 pantetheine-phosphate adenylyltransferase -
  HBA50_RS07355 (HBA50_07355) rsmD 1478513..1479052 (-) 540 WP_045499030.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  HBA50_RS07360 (HBA50_07360) yidD 1479138..1479398 (-) 261 WP_080940875.1 membrane protein insertion efficiency factor YidD -
  HBA50_RS07365 (HBA50_07365) - 1479395..1480126 (-) 732 WP_045499026.1 pseudouridine synthase -
  HBA50_RS07370 (HBA50_07370) scpB 1480260..1480805 (-) 546 WP_005590827.1 SMC-Scp complex subunit ScpB -
  HBA50_RS07375 (HBA50_07375) - 1480798..1481508 (-) 711 WP_045499023.1 segregation/condensation protein A -
  HBA50_RS07380 (HBA50_07380) xerD 1481511..1482242 (-) 732 WP_045499020.1 site-specific tyrosine recombinase XerD -
  HBA50_RS07385 (HBA50_07385) cbpB 1482239..1482700 (-) 462 WP_045499017.1 cyclic-di-AMP-binding protein CbpB -

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 38308.73 Da        Isoelectric Point: 5.3084

>NTDB_id=430228 HBA50_RS07345 WP_037586341.1 1476948..1478015(-) (sepM) [Streptococcus cristatus ATCC 51100]
MTKENKRGLTVVGCAGVASIIVLVLFLFSFIVPLPYYIEVPGGAEDIRKVLTVDGKEDQAAGSYNFVTVGIQHATFAHLV
YAWLTPFTDIYSAQDMTGGSSDAEYMRINQFYMETSQNMAKYQGLKAAGKDIKMNYLGVYVLKVAPNSTFKGILNIADTV
TGVNDKTFESSEDLVKYVNSQALGDSVKVTYEEDGKTKTATGKIIKLENGKNGIGISLIDRTEVNSSVPIEFSTEGIGGP
SAGLMFSLAIYTQLANPDLRDGRVIAGTGSIDREGKVGDIGGIDKKVVSAAKIGATIFFAPDNPVSEEEKKANPKAKTNY
ETALEAAKEIKTDMKIVPVKTLQDAIDYLEKTKKS

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=430228 HBA50_RS07345 WP_037586341.1 1476948..1478015(-) (sepM) [Streptococcus cristatus ATCC 51100]
ATGACGAAGGAAAATAAACGTGGTTTAACAGTAGTTGGTTGTGCTGGAGTAGCCTCTATTATCGTGCTTGTGCTCTTCCT
ATTCTCTTTCATTGTTCCATTGCCATACTATATTGAGGTGCCTGGGGGAGCAGAAGACATTCGAAAGGTTCTGACTGTGG
ATGGAAAAGAGGACCAGGCAGCAGGTTCCTATAACTTTGTAACTGTTGGGATCCAGCATGCAACCTTTGCCCATCTGGTC
TACGCTTGGTTGACCCCTTTTACAGATATTTATTCGGCTCAGGACATGACAGGTGGCTCGAGTGATGCTGAGTATATGCG
CATCAACCAATTTTATATGGAAACGTCGCAGAATATGGCCAAATACCAAGGCCTCAAAGCTGCAGGAAAAGACATCAAGA
TGAACTATCTGGGTGTCTATGTTTTAAAAGTAGCTCCGAATTCGACCTTTAAAGGAATTTTGAATATTGCGGATACAGTT
ACGGGAGTCAATGATAAGACCTTTGAAAGCTCGGAAGACCTGGTCAAATATGTCAATTCTCAGGCTCTGGGCGATAGTGT
CAAAGTGACCTACGAGGAAGATGGAAAAACCAAGACGGCGACGGGAAAAATCATCAAGCTGGAAAATGGCAAAAACGGAA
TTGGCATTAGTTTGATTGACCGCACGGAAGTCAACAGTAGTGTTCCGATTGAATTTTCAACTGAAGGTATCGGTGGTCCC
AGTGCTGGCCTCATGTTTAGCCTAGCCATTTATACTCAGCTAGCCAATCCAGACCTGCGAGACGGCCGCGTGATTGCGGG
AACGGGCAGCATTGACAGAGAAGGCAAGGTCGGTGATATTGGTGGGATTGACAAAAAAGTCGTCTCTGCTGCCAAGATCG
GAGCGACAATCTTTTTTGCTCCAGATAATCCTGTCAGCGAGGAAGAAAAAAAGGCTAATCCCAAAGCCAAGACCAACTAT
GAAACGGCGCTTGAAGCAGCCAAGGAAATCAAAACGGATATGAAAATCGTGCCTGTCAAAACCCTTCAGGATGCGATTGA
TTATTTAGAAAAAACCAAAAAATCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

63.746

93.239

0.594