Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   HBA50_RS07160 Genome accession   NZ_CP050133
Coordinates   1441188..1441901 (+) Length   237 a.a.
NCBI ID   WP_045499118.1    Uniprot ID   -
Organism   Streptococcus cristatus ATCC 51100     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1436188..1446901
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA50_RS07150 (HBA50_07150) treC 1437341..1438972 (-) 1632 WP_045499123.1 alpha,alpha-phosphotrehalase -
  HBA50_RS07155 (HBA50_07155) treP 1439035..1441002 (-) 1968 WP_045499120.1 PTS system trehalose-specific EIIBC component -
  HBA50_RS07160 (HBA50_07160) treR 1441188..1441901 (+) 714 WP_045499118.1 trehalose operon repressor Regulator
  HBA50_RS07165 (HBA50_07165) - 1442256..1443596 (-) 1341 WP_045499115.1 hemolysin family protein -
  HBA50_RS07170 (HBA50_07170) - 1443687..1445333 (-) 1647 WP_045499112.1 phosphoenolpyruvate carboxykinase (ATP) -
  HBA50_RS07175 (HBA50_07175) - 1445431..1446555 (-) 1125 WP_045499109.1 AI-2E family transporter -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27744.84 Da        Isoelectric Point: 9.4514

>NTDB_id=430226 HBA50_RS07160 WP_045499118.1 1441188..1441901(+) (treR) [Streptococcus cristatus ATCC 51100]
MKKYKQLFKQLERDILGEKYQLGDFLPSEHQLMEIYQVSRDTVRKALALLQEEGLIKKVRGQGSKVVKQKQLDFPVSNLT
SYQELVAQHQLQSKTNVISLDKITVDKKLSKTTGFPEYRLVWRIVRQRVVDNIASVLDIDYLDKSLVPDLTREIGEHSIY
AYLEETLKLNIAYARKEITIDHVSDQDQILLDIGRDQHVVSIKSQVYLADGRQFQYTESRHKLDKFRFVDFATRQKE

Nucleotide


Download         Length: 714 bp        

>NTDB_id=430226 HBA50_RS07160 WP_045499118.1 1441188..1441901(+) (treR) [Streptococcus cristatus ATCC 51100]
ATGAAGAAATACAAACAATTATTCAAACAACTTGAAAGAGATATTCTAGGCGAAAAATACCAGCTCGGTGACTTTCTTCC
TAGTGAACATCAGCTGATGGAAATCTACCAAGTCAGTCGGGATACAGTTCGCAAGGCTTTAGCGCTCTTGCAAGAAGAGG
GACTGATTAAGAAAGTGCGGGGGCAGGGCTCCAAAGTCGTCAAACAGAAACAACTAGACTTCCCTGTTTCTAACTTAACC
AGTTATCAAGAATTAGTGGCACAGCATCAGCTTCAATCCAAGACCAATGTCATCAGCCTTGATAAGATCACTGTAGATAA
AAAGCTCTCAAAAACAACTGGATTTCCAGAGTACCGCTTGGTTTGGCGTATTGTCCGGCAGCGAGTGGTCGACAATATCG
CTTCTGTCTTGGATATTGACTATCTAGATAAAAGCTTGGTGCCAGATCTAACCAGAGAAATCGGAGAGCATTCTATCTAT
GCCTACTTAGAAGAAACCTTAAAGCTTAACATTGCCTATGCTAGAAAAGAAATTACAATCGATCATGTTAGTGACCAAGA
TCAGATCCTTCTGGACATTGGCCGAGACCAGCATGTCGTTTCTATCAAATCTCAGGTCTATCTAGCTGATGGCCGCCAGT
TTCAATACACAGAGAGTCGGCACAAACTAGATAAATTTCGCTTTGTGGACTTTGCTACTCGGCAGAAAGAATGA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

62.447

100

0.624