Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HAQ10_RS20380 Genome accession   NZ_CP050114
Coordinates   4300118..4300519 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas oryzae pv. oryzae strain K3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4295118..4305519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HAQ10_RS20360 tsaB 4296121..4296840 (+) 720 WP_011408180.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  HAQ10_RS20365 - 4296837..4297751 (+) 915 WP_011408181.1 ADP-ribosylglycohydrolase family protein -
  HAQ10_RS20370 - 4298046..4298921 (-) 876 WP_011258506.1 TonB family protein -
  HAQ10_RS20375 gshB 4298918..4299868 (-) 951 WP_011408182.1 glutathione synthase -
  HAQ10_RS20380 pilG 4300118..4300519 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  HAQ10_RS20385 - 4300537..4300899 (+) 363 WP_011258508.1 response regulator -
  HAQ10_RS20390 - 4300899..4301429 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  HAQ10_RS20395 - 4301469..4303505 (+) 2037 WP_011258510.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=430034 HAQ10_RS20380 WP_005913706.1 4300118..4300519(+) (pilG) [Xanthomonas oryzae pv. oryzae strain K3]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=430034 HAQ10_RS20380 WP_005913706.1 4300118..4300519(+) (pilG) [Xanthomonas oryzae pv. oryzae strain K3]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTCAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTTGACATCATGATGCCGCGCCTGGATGGCTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTAATCATGTTGTCGTCCAAGGATGGGCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTATTGAGCGCAATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684