Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HA513_RS14950 Genome accession   NZ_CP050067
Coordinates   3064065..3064688 (-) Length   207 a.a.
NCBI ID   WP_026612357.1    Uniprot ID   A0AAW9LN46
Organism   Klebsiella aerogenes strain 035     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3059065..3069688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HA513_RS14935 (HA513_14935) helD 3059300..3061354 (-) 2055 WP_047041726.1 DNA helicase IV -
  HA513_RS14940 (HA513_14940) - 3061478..3061924 (+) 447 WP_015367426.1 YccF domain-containing protein -
  HA513_RS14945 (HA513_14945) yccS 3061942..3064077 (+) 2136 WP_047077255.1 YccS family putative transporter -
  HA513_RS14950 (HA513_14950) sxy/tfoX 3064065..3064688 (-) 624 WP_026612357.1 TfoX/Sxy family DNA transformation protein Regulator
  HA513_RS14955 (HA513_14955) sulA 3065138..3065647 (+) 510 WP_020079240.1 SOS-induced cell division inhibitor SulA -
  HA513_RS14960 (HA513_14960) ompA 3066000..3067052 (+) 1053 WP_026612358.1 porin OmpA -
  HA513_RS14965 (HA513_14965) matP 3067144..3067596 (-) 453 WP_015367432.1 macrodomain Ter protein MatP -
  HA513_RS14970 (HA513_14970) - 3067782..3069539 (+) 1758 WP_058676261.1 Lon protease family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23612.33 Da        Isoelectric Point: 10.0181

>NTDB_id=429885 HA513_RS14950 WP_026612357.1 3064065..3064688(-) (sxy/tfoX) [Klebsiella aerogenes strain 035]
MKKISKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSASYRVEHHSPMLMMRKNGRPVALK
YYRIDEALWQDSKMLFHLSQLSLHSARSEKQHQRDSGRLKNLPNISFHMELMLIHAGITDVKMLRTLGAEKSWLKLREHN
KGISINVLESLAGAIAGIHSAALPAQRRQELREWANTQGYSVEDYSG

Nucleotide


Download         Length: 624 bp        

>NTDB_id=429885 HA513_RS14950 WP_026612357.1 3064065..3064688(-) (sxy/tfoX) [Klebsiella aerogenes strain 035]
ATGAAGAAAATTTCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCCCCCTTAGGTAAAATCAGTAGCCGGCCTTT
ATTCGGCGGGTATAGTCTGGCGATTGAAAATACCGTATTCGCCATGGTGGCTGAGGGCGAAATCTATCTTAGGGTTTGCG
AACAAAGCGCCTCTTATCGGGTTGAACATCACAGCCCGATGCTGATGATGCGCAAGAATGGCCGGCCAGTGGCCTTAAAG
TATTACCGGATAGATGAAGCACTATGGCAGGACAGTAAAATGCTGTTTCACCTATCGCAGCTGTCATTGCATTCGGCGCG
AAGCGAAAAGCAGCATCAGCGTGATTCCGGCAGACTAAAGAATTTGCCTAATATCAGCTTCCATATGGAGTTGATGTTGA
TCCATGCCGGAATAACCGATGTGAAAATGCTGCGTACACTCGGGGCGGAAAAGAGCTGGTTAAAATTGAGAGAGCATAAT
AAAGGAATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCATTCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACACAAGGATACAGCGTGGAGGATTATTCCGGTTGA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.777

95.169

0.493