Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   IF735_RS10175 Genome accession   NZ_CP062408
Coordinates   2048292..2049092 (-) Length   266 a.a.
NCBI ID   WP_031910980.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_AN_247     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2043292..2054092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF735_RS10160 (IF735_10120) - 2043321..2044577 (-) 1257 WP_000566670.1 DUF3578 domain-containing protein -
  IF735_RS10165 (IF735_10125) rlmH 2044899..2045378 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  IF735_RS10170 (IF735_10130) adsA 2045746..2048064 (-) 2319 WP_000645771.1 LPXTG-anchored adenosine synthase AdsA -
  IF735_RS10175 (IF735_10135) vicX 2048292..2049092 (-) 801 WP_031910980.1 MBL fold metallo-hydrolase Regulator
  IF735_RS10180 (IF735_10140) yycI 2049481..2050269 (-) 789 WP_001104168.1 two-component system regulatory protein YycI -
  IF735_RS10185 (IF735_10145) yycH 2050270..2051604 (-) 1335 WP_001060140.1 two-component system activity regulator YycH -
  IF735_RS10190 (IF735_10150) walK 2051597..2053423 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30343.54 Da        Isoelectric Point: 6.3392

>NTDB_id=429735 IF735_RS10175 WP_031910980.1 2048292..2049092(-) (vicX) [Staphylococcus aureus strain NAS_AN_247]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILSDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=429735 IF735_RS10175 WP_031910980.1 2048292..2049092(-) (vicX) [Staphylococcus aureus strain NAS_AN_247]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAAGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477