Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IF751_RS11495 Genome accession   NZ_CP062407
Coordinates   2381096..2381914 (+) Length   272 a.a.
NCBI ID   WP_001124417.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_NP_181     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2376096..2386914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF751_RS11470 (IF751_11380) - 2376715..2377245 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  IF751_RS11475 (IF751_11385) yfkAB 2377505..2378656 (-) 1152 WP_020977395.1 radical SAM/CxCxxxxC motif protein YfkAB -
  IF751_RS11480 (IF751_11390) - 2378880..2379041 (+) 162 WP_001005407.1 SE1561 family protein -
  IF751_RS11485 (IF751_11395) - 2379171..2379686 (+) 516 WP_020977394.1 type 1 glutamine amidotransferase domain-containing protein -
  IF751_RS11490 (IF751_11400) sgtB 2380026..2380835 (+) 810 WP_000830379.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  IF751_RS11495 (IF751_11405) recX 2381096..2381914 (+) 819 WP_001124417.1 recombination regulator RecX Regulator
  IF751_RS11500 (IF751_11410) - 2381892..2382206 (+) 315 WP_000435806.1 YfhH family protein -
  IF751_RS11505 (IF751_11415) - 2382221..2383738 (+) 1518 WP_020977393.1 ABC transporter ATP-binding protein -
  IF751_RS11510 (IF751_11420) - 2383747..2384583 (+) 837 WP_000886452.1 hypothetical protein -
  IF751_RS11515 (IF751_11425) - 2384844..2385821 (-) 978 WP_000379098.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32244.13 Da        Isoelectric Point: 5.9211

>NTDB_id=429635 IF751_RS11495 WP_001124417.1 2381096..2381914(+) (recX) [Staphylococcus aureus strain NAS_NP_181]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
ILYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=429635 IF751_RS11495 WP_001124417.1 2381096..2381914(+) (recX) [Staphylococcus aureus strain NAS_NP_181]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGATATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACTATATTTACAAAAAGAAGAGATATCAGAACAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993