Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   IF751_RS07125 Genome accession   NZ_CP062407
Coordinates   1500761..1501561 (-) Length   266 a.a.
NCBI ID   WP_020976813.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_NP_181     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1495761..1506561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF751_RS07105 - 1496340..1496744 (-) 405 WP_020976817.1 hypothetical protein -
  IF751_RS07110 - 1496692..1497276 (-) 585 WP_020976816.1 dsDNA nuclease domain-containing protein -
  IF751_RS07115 (IF751_07045) rlmH 1497375..1497854 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  IF751_RS07120 (IF751_07050) adsA 1498222..1500534 (-) 2313 WP_064133497.1 LPXTG-anchored adenosine synthase AdsA -
  IF751_RS07125 (IF751_07055) vicX 1500761..1501561 (-) 801 WP_020976813.1 MBL fold metallo-hydrolase Regulator
  IF751_RS07130 (IF751_07060) yycI 1501950..1502738 (-) 789 WP_001104161.1 two-component system regulatory protein YycI -
  IF751_RS07135 (IF751_07065) yycH 1502739..1504073 (-) 1335 WP_001060140.1 two-component system activity regulator YycH -
  IF751_RS07140 (IF751_07070) walK 1504066..1505892 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.54 Da        Isoelectric Point: 6.3392

>NTDB_id=429617 IF751_RS07125 WP_020976813.1 1500761..1501561(-) (vicX) [Staphylococcus aureus strain NAS_NP_181]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDIESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=429617 IF751_RS07125 WP_020976813.1 1500761..1501561(-) (vicX) [Staphylococcus aureus strain NAS_NP_181]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAGGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATATTGAATCGTTTAATGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTGACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGTGATATGGGTCACGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477