Detailed information NTG0042919

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: D7S_RS10060
• Genome accession: NC_017846
• Coordinates: 2016176..2017516 (+)
• Length: 446 a.a.
• NCBI ID: WP_005540264.1
• Uniprot ID: A0A142G2C3
• Organism: Aggregatibacter actinomycetemcomitans D7S-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2011176..2022516

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D7S_RS12355	-	2011553..2011675 (-)	123	WP_369122476.1	hypothetical protein	-
D7S_RS10045 (D7S_02137)	lrp	2012226..2012705 (+)	480	WP_005540269.1	leucine-responsive transcriptional regulator Lrp	-
D7S_RS10050 (D7S_02138)	-	2012709..2015453 (+)	2745	WP_005595076.1	DNA translocase FtsK	-
D7S_RS10055 (D7S_02139)	lolA	2015546..2016163 (+)	618	WP_005540265.1	outer membrane lipoprotein chaperone LolA	-
D7S_RS10060 (D7S_02140)	rarA	2016176..2017516 (+)	1341	WP_005540264.1	replication-associated recombination protein A	Machinery gene
D7S_RS10065 (D7S_02141)	-	2018013..2019680 (-)	1668	WP_005540262.1	anaerobic C4-dicarboxylate transporter	-
D7S_RS10070 (D7S_02142)	serS	2019987..2021303 (+)	1317	WP_014702547.1	serine--tRNA ligase	-
D7S_RS10075 (D7S_02143)	cdd	2021383..2022279 (-)	897	WP_005549823.1	cytidine deaminase	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49757.72 Da
• Isoelectric Point: 6.5134

>NTDB_id=42919 D7S_RS10060 WP_005540264.1 2016176..2017516(+) (rarA) [Aggregatibacter actinomycetemcomitans D7S-1]
MSNFSFDFNENDFRPLAARMRPTTLAQYCGQSHLLGEGKPLRKAIEAGYVHSMIFWGPPGTGKTTLAEIISHRINAEVER
ISAVTSGIKEIREAIDKAKQNKLAGLRTILFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARVY
ILKPLSAQEIERVLQQAIDDPENGLGKVRLNLQENLLSLLAEYVNGDARLALNCLEMMVDMAGESENGKILDRTLLTEVL
GERQARFDKQGDLFYDFISALHKSIRGSAPDAALYWYARIITAGGEPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAAEGERAIAQAIVYLAVAPKSNAVYLAFKAAKKLATESADFDVPEHLRNAPTSFMKDLGFGAEYRYAHNEPNAYAA
GENYFPPQLKDTQFYFPTTRGMEIKIKEKLEWLRGLDQESGKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=42919 D7S_RS10060 WP_005540264.1 2016176..2017516(+) (rarA) [Aggregatibacter actinomycetemcomitans D7S-1]
ATGTCTAACTTCAGCTTTGATTTCAACGAAAATGACTTTCGCCCGCTTGCTGCAAGAATGCGCCCCACCACCTTGGCGCA
ATATTGTGGTCAGTCTCATTTATTGGGCGAAGGAAAACCGTTGCGCAAAGCTATTGAAGCGGGATATGTTCATTCCATGA
TTTTCTGGGGCCCGCCTGGTACCGGTAAAACCACTTTGGCGGAAATTATTTCCCATCGCATTAATGCGGAAGTGGAGCGC
ATTTCCGCCGTCACCAGCGGCATTAAAGAAATCCGTGAAGCCATCGACAAAGCCAAACAAAACAAACTGGCGGGTTTGCG
CACCATTTTGTTTGTAGATGAAGTGCATCGTTTCAACAAAAGCCAGCAAGACGCTTTCCTGCCGCATATTGAAGACGGTA
CCATTATTTTTATCGGCGCTACCACGGAAAATCCCTCCTTTGAACTCAATAACGCCTTGCTTTCCCGCGCGCGGGTTTAT
ATTCTAAAACCGCTTTCTGCGCAGGAAATCGAACGGGTTTTACAGCAAGCCATTGATGACCCGGAAAACGGTTTAGGCAA
AGTGCGGTTAAATTTACAAGAGAATTTATTGTCCCTGTTGGCAGAATACGTCAACGGCGACGCCCGTCTTGCTTTGAACT
GCCTGGAAATGATGGTGGACATGGCGGGCGAATCGGAAAACGGCAAAATTTTAGACCGCACTTTACTCACGGAAGTGTTG
GGCGAACGGCAGGCGCGTTTTGATAAACAAGGTGACCTTTTCTACGATTTCATTTCCGCACTACACAAATCCATTCGTGG
ATCCGCCCCTGATGCGGCGTTATACTGGTACGCGCGCATTATCACTGCCGGTGGTGAGCCTCTTTATGTGGCGCGTCGCT
TATTGGCAATTGCTTCCGAAGATGTGGGCAACGCCGACCCGCGCGCCATGCAGGTGGCGCTCGCCGCCTGGGATTGTTTC
ACCCGCGTCGGTGCCGCCGAAGGCGAACGTGCTATCGCACAAGCCATTGTGTATTTAGCCGTTGCACCGAAAAGCAACGC
CGTTTATCTCGCTTTCAAAGCCGCCAAAAAATTGGCGACCGAATCCGCCGATTTCGACGTCCCTGAACATCTCCGCAACG
CCCCGACCAGCTTCATGAAAGACCTCGGCTTCGGCGCCGAATACCGCTACGCCCATAATGAACCTAACGCCTACGCTGCC
GGCGAAAACTACTTCCCGCCACAACTGAAAGACACCCAATTCTATTTCCCGACCACCAGAGGCATGGAAATTAAGATTAA
GGAGAAGTTGGAATGGCTGCGGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-163)

• AAA C-terminal domain (AAA_assoc_2) (189-266)

3D structure

• AlphaFold DB: A0A142G2C3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.416	92.152	0.363