Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G9Q37_RS12275 Genome accession   NZ_CP049989
Coordinates   2601592..2601987 (-) Length   131 a.a.
NCBI ID   WP_420810286.1    Uniprot ID   -
Organism   Hydrogenophaga crocea strain BA0156     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2596592..2606987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G9Q37_RS12260 (G9Q37_12260) - 2598337..2600595 (-) 2259 WP_166227464.1 methyl-accepting chemotaxis protein -
  G9Q37_RS12265 (G9Q37_12265) - 2600659..2601198 (-) 540 WP_166227465.1 chemotaxis protein CheW -
  G9Q37_RS12270 (G9Q37_12270) - 2601227..2601592 (-) 366 WP_166227466.1 response regulator -
  G9Q37_RS12275 (G9Q37_12275) pilG 2601592..2601987 (-) 396 WP_420810286.1 response regulator Regulator
  G9Q37_RS12280 (G9Q37_12280) - 2602080..2602253 (-) 174 WP_166227467.1 rubredoxin -
  G9Q37_RS12285 (G9Q37_12285) thiD 2602402..2603340 (+) 939 WP_166227468.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  G9Q37_RS12290 (G9Q37_12290) hemL 2603351..2604652 (+) 1302 WP_166227469.1 glutamate-1-semialdehyde 2,1-aminomutase -
  G9Q37_RS12295 (G9Q37_12295) - 2604674..2606047 (-) 1374 WP_240936382.1 MFS transporter -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14445.63 Da        Isoelectric Point: 6.9487

>NTDB_id=429178 G9Q37_RS12275 WP_420810286.1 2601592..2601987(-) (pilG) [Hydrogenophaga crocea strain BA0156]
MSATSALKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKINDYQPDLIFCDILMPRLDGYQTCAIIKRNARFAG
IPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQAVQQFGVQFNGVS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=429178 G9Q37_RS12275 WP_420810286.1 2601592..2601987(-) (pilG) [Hydrogenophaga crocea strain BA0156]
GTGAGCGCAACGTCCGCCCTGAAGGTTCTTGTCGTCGACGACAGCAACACCATCCGGCGCAGTGCCGAGATTTTTCTGAA
GCAGGGCGGCCATGAGGTCCTGCTGGCCGACGACGGCTTCGACGCCCTGGCCAAGATCAACGACTACCAGCCCGATCTGA
TCTTCTGCGACATCCTGATGCCGCGCCTCGACGGCTATCAGACCTGCGCCATCATCAAGCGCAACGCCCGCTTCGCCGGC
ATTCCCGTCGTCATGCTGTCCTCCAAGGACGGTGTCTTCGACAAGGCCCGCGGCCGCATGGTCGGCTCGCAGGACTACCT
CACCAAGCCCTTCACCAAAGACCAGCTGCTGCAGGCCGTGCAGCAGTTCGGCGTGCAATTCAACGGAGTGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

62.069

88.55

0.55