Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BHV55_RS20925 Genome accession   NZ_CP049978
Coordinates   4124239..4125033 (-) Length   264 a.a.
NCBI ID   WP_021727703.1    Uniprot ID   A0A9X3FF97
Organism   Bacillus sp. RZ2MS9     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4119239..4130033
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BHV55_RS20900 (BHV55_20900) - 4119764..4121836 (-) 2073 WP_070756946.1 sigma-54-dependent Fis family transcriptional regulator -
  BHV55_RS20905 (BHV55_20905) - 4121974..4122207 (+) 234 WP_001190210.1 DUF2627 domain-containing protein -
  BHV55_RS20910 (BHV55_20910) - 4122257..4122985 (-) 729 WP_000172572.1 glycerophosphodiester phosphodiesterase -
  BHV55_RS20915 (BHV55_20915) - 4123036..4123182 (+) 147 WP_001247671.1 YycC family protein -
  BHV55_RS20920 (BHV55_20920) - 4123424..4123987 (-) 564 WP_000428232.1 PRK06770 family protein -
  BHV55_RS20925 (BHV55_20925) spo0A 4124239..4125033 (-) 795 WP_021727703.1 sporulation transcription factor Spo0A Regulator
  BHV55_RS20930 (BHV55_20930) spoIVB 4125324..4126622 (-) 1299 WP_002098091.1 SpoIVB peptidase -
  BHV55_RS20935 (BHV55_20935) recN 4126741..4128480 (-) 1740 WP_000947765.1 DNA repair protein RecN Machinery gene
  BHV55_RS20940 (BHV55_20940) argR 4128745..4129194 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29445.20 Da        Isoelectric Point: 7.1175

>NTDB_id=429109 BHV55_RS20925 WP_021727703.1 4124239..4125033(-) (spo0A) [Bacillus sp. RZ2MS9]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANTMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=429109 BHV55_RS20925 WP_021727703.1 4124239..4125033(-) (spo0A) [Bacillus sp. RZ2MS9]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAGAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTTGGCCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACACTATGATTAAGCGTCCAC
TACCATCATTCCGATCAGCCACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAATGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818