Detailed information NTG0429025

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G6Z49_RS03150
• Genome accession: NZ_CP049957
• Coordinates: 643539..644801 (+)
• Length: 420 a.a.
• NCBI ID: WP_207788939.1
• Uniprot ID: -
• Organism: Bordetella trematum strain E202
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 638539..649801

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G6Z49_RS03125	-	640418..640804 (+)	387	WP_025513051.1	MOSC N-terminal beta barrel domain-containing protein	-
G6Z49_RS03130	-	640811..642001 (-)	1191	WP_038854468.1	benzoate/H(+) symporter BenE family transporter	-
G6Z49_RS03135	-	641998..642249 (-)	252	WP_033535489.1	YfhL family 4Fe-4S dicluster ferredoxin	-
G6Z49_RS03140	coaD	642324..642830 (-)	507	WP_025513049.1	pantetheine-phosphate adenylyltransferase	-
G6Z49_RS03145	rsmD	642852..643472 (-)	621	WP_025513048.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
G6Z49_RS03150	pilA	643539..644801 (+)	1263	WP_207788939.1	signal recognition particle-docking protein FtsY	Machinery gene
G6Z49_RS03155	-	645063..645689 (+)	627	WP_033535487.1	glutathione S-transferase family protein	-
G6Z49_RS03160	-	645735..647048 (+)	1314	WP_025513045.1	MFS transporter	-
G6Z49_RS03165	-	647066..648067 (-)	1002	WP_025513044.1	AraC family transcriptional regulator	-
G6Z49_RS03170	-	648240..649007 (+)	768	WP_025513043.1	aldolase	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 43095.56 Da
• Isoelectric Point: 6.5200

>NTDB_id=429025 G6Z49_RS03150 WP_207788939.1 643539..644801(+) (pilA) [Bordetella trematum strain E202]
MPMFRFFKKKTPAPAAPATPAPPPQEETIASPAPTPEAAPAAAPAAAPVAAPEAPAAQPPSTPPPAPVPEPAPVPAPSPV
APPSPVSAPAAAPTAPVTPAAAAAEPAAEPQAAAAPKKASWLSRLKQGLARTGQSIGSIFVGVKVDENLFEELESALIMA
DAGIEATESLLTALRARVKKERIEDAAQVKVALRQLLAEHLKPLERRFELGRAQPLVVMIAGVNGAGKTTSIGKLAHTFQ
RQGASVLLAAGDTFRAAAREQLIEWGSRNNVTVIAQEGGDPAAVAFDAVNAGRAREAGVVMVDTAGRLPTQLHLMEELKK
IRRVIGKADAKAPHEVLLVVDGNTGQNALAQIRAFDAAIQLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIGVGE
GLEDLQPFVAEEFAAALLSD

Nucleotide

• Length: 1263 bp

>NTDB_id=429025 G6Z49_RS03150 WP_207788939.1 643539..644801(+) (pilA) [Bordetella trematum strain E202]
TTGCCTATGTTCCGCTTCTTCAAGAAAAAAACCCCTGCGCCCGCCGCGCCGGCTACGCCGGCCCCGCCGCCGCAGGAAGA
AACCATCGCGAGCCCGGCGCCGACGCCTGAGGCCGCGCCTGCGGCTGCGCCAGCGGCTGCGCCTGTAGCGGCGCCCGAGG
CCCCGGCCGCTCAGCCGCCGTCCACGCCGCCGCCTGCCCCGGTCCCGGAGCCTGCCCCGGTCCCGGCGCCTTCGCCCGTA
GCGCCGCCTTCGCCGGTATCGGCGCCCGCGGCGGCGCCGACCGCGCCCGTGACGCCTGCCGCCGCAGCCGCCGAGCCGGC
GGCGGAGCCGCAAGCGGCGGCCGCACCCAAGAAAGCCTCCTGGCTCAGCCGCCTCAAGCAGGGGCTGGCTCGTACCGGCC
AGAGCATCGGCAGCATCTTTGTCGGCGTCAAGGTCGACGAGAATCTGTTCGAGGAGCTGGAGTCGGCCCTCATCATGGCC
GACGCGGGCATCGAGGCCACCGAAAGTCTGCTGACCGCTTTGCGCGCACGCGTCAAGAAAGAACGCATCGAGGATGCCGC
CCAGGTCAAGGTGGCCTTGCGCCAGCTGCTGGCCGAGCATCTCAAACCGCTTGAGCGCCGCTTCGAGCTGGGCCGCGCCC
AACCGCTGGTGGTCATGATTGCGGGCGTGAACGGCGCCGGCAAGACGACTTCCATCGGCAAGCTGGCGCATACCTTCCAG
CGCCAGGGCGCCAGCGTGCTGCTGGCCGCGGGCGATACCTTCCGCGCGGCGGCGCGCGAGCAGCTGATCGAGTGGGGCAG
CCGCAACAATGTCACCGTCATTGCCCAGGAGGGCGGCGACCCGGCCGCTGTCGCCTTTGACGCGGTCAACGCCGGCAGGG
CGCGTGAGGCGGGCGTGGTCATGGTGGACACGGCCGGCCGCCTGCCTACCCAGCTGCACCTGATGGAAGAGCTCAAGAAG
ATCCGCCGCGTGATCGGCAAGGCCGACGCCAAGGCGCCGCACGAGGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGAA
CGCCCTGGCCCAGATCCGCGCCTTCGACGCCGCGATCCAGCTCACCGGCCTGGTGGTGACCAAGCTCGATGGCACCGCCA
AGGGTGGCACGCTGGCGGCCGTCGCCGCGGGCAGCCAGGGGGTGCGGCCCATCCCGGTCTACTGGATCGGCGTGGGCGAG
GGCCTGGAAGACCTGCAGCCCTTTGTCGCCGAAGAGTTCGCCGCCGCGCTGCTGTCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (216-418)

• SRP54-type protein, helical bundle domain (SRP54_N) (134-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	46.868	100	0.481