Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G6Z48_RS14725 Genome accession   NZ_CP049956
Coordinates   3089174..3089575 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain NCTC10498     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3084174..3094575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G6Z48_RS14710 - 3086185..3088221 (-) 2037 WP_005410715.1 methyl-accepting chemotaxis protein -
  G6Z48_RS14715 - 3088263..3088793 (-) 531 WP_005410716.1 chemotaxis protein CheW -
  G6Z48_RS14720 - 3088793..3089155 (-) 363 WP_005410717.1 response regulator -
  G6Z48_RS14725 pilG 3089174..3089575 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  G6Z48_RS14730 gshB 3089816..3090763 (+) 948 WP_005410718.1 glutathione synthase -
  G6Z48_RS14735 - 3090763..3091647 (+) 885 WP_005410719.1 energy transducer TonB -
  G6Z48_RS14740 tsaB 3091939..3092652 (-) 714 WP_005410720.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=429013 G6Z48_RS14725 WP_005418455.1 3089174..3089575(-) (pilG) [Stenotrophomonas maltophilia strain NCTC10498]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=429013 G6Z48_RS14725 WP_005418455.1 3089174..3089575(-) (pilG) [Stenotrophomonas maltophilia strain NCTC10498]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677