Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IF781_RS09375 Genome accession   NZ_CP062398
Coordinates   1907192..1908010 (-) Length   272 a.a.
NCBI ID   WP_064305772.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_OP_154     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1902192..1913010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF781_RS09355 (IF781_09310) - 1903285..1904262 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  IF781_RS09360 (IF781_09315) - 1904523..1905359 (-) 837 WP_000886462.1 membrane protein -
  IF781_RS09365 (IF781_09320) - 1905368..1906885 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  IF781_RS09370 (IF781_09325) - 1906900..1907214 (-) 315 WP_000435806.1 YfhH family protein -
  IF781_RS09375 (IF781_09330) recX 1907192..1908010 (-) 819 WP_064305772.1 recombination regulator RecX Regulator
  IF781_RS09380 (IF781_09335) sgtB 1908270..1909079 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  IF781_RS09385 (IF781_09340) - 1909419..1909934 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  IF781_RS09390 (IF781_09345) - 1910065..1910226 (-) 162 WP_001005407.1 SE1561 family protein -
  IF781_RS09395 (IF781_09350) yfkAB 1910450..1911601 (+) 1152 WP_001089621.1 radical SAM/CxCxxxxC motif protein YfkAB -
  IF781_RS09400 (IF781_09355) - 1911861..1912391 (-) 531 WP_064140100.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32245.07 Da        Isoelectric Point: 5.9211

>NTDB_id=428850 IF781_RS09375 WP_064305772.1 1907192..1908010(-) (recX) [Staphylococcus aureus strain NAS_OP_154]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEVSEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=428850 IF781_RS09375 WP_064305772.1 1907192..1908010(-) (recX) [Staphylococcus aureus strain NAS_OP_154]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATTCAATATTTACAAAAAGAAGAGGTATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTTTATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGACCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993