Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   G4G26_RS14130 Genome accession   NZ_CP049924
Coordinates   2738205..2738951 (-) Length   248 a.a.
NCBI ID   WP_072592551.1    Uniprot ID   -
Organism   Bacillus subtilis strain So1b     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2733205..2743951
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4G26_RS14105 (G4G26_14140) mreC 2733611..2734483 (-) 873 WP_009967915.1 rod shape-determining protein MreC -
  G4G26_RS14110 (G4G26_14145) mreB 2734514..2735527 (-) 1014 WP_003229650.1 cell shape-determining protein MreB -
  G4G26_RS14115 (G4G26_14150) radC 2735619..2736314 (-) 696 WP_003246034.1 DNA repair protein RadC -
  G4G26_RS14120 (G4G26_14155) maf 2736351..2736920 (-) 570 WP_004398496.1 Maf family nucleotide pyrophosphatase -
  G4G26_RS14125 (G4G26_14160) spoIIB 2737073..2738071 (-) 999 WP_015714459.1 stage II sporulation protein SpoIIB -
  G4G26_RS14130 (G4G26_14165) comC 2738205..2738951 (-) 747 WP_072592551.1 A24 family peptidase Machinery gene
  G4G26_RS14135 (G4G26_14170) folC 2739091..2740383 (-) 1293 WP_163259816.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  G4G26_RS14140 (G4G26_14175) valS 2740443..2743085 (-) 2643 WP_163259880.1 valine--tRNA ligase -
  G4G26_RS14145 (G4G26_14180) - 2743533..2743724 (+) 192 WP_003222590.1 hypothetical protein -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 26422.99 Da        Isoelectric Point: 9.7944

>NTDB_id=428750 G4G26_RS14130 WP_072592551.1 2738205..2738951(-) (comC) [Bacillus subtilis strain So1b]
MLSILFIFGLILGSFYYTAGCRIPLHLSIIAPRSSCPFCRRTLTPAELIPILSFLFQKGKCKSCGHRISFMYPAAELVTA
CLFAAAGIRFGTSLELFPAVVFISLLIIVAVTDIHFMLIPNRILIFFLPFLAAARLISPLDSWYAGLLGAAAGFLFLAVI
AAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALG

Nucleotide


Download         Length: 747 bp        

>NTDB_id=428750 G4G26_RS14130 WP_072592551.1 2738205..2738951(-) (comC) [Bacillus subtilis strain So1b]
ATGCTATCCATTCTTTTTATCTTCGGACTTATCCTTGGTTCTTTTTACTATACGGCCGGGTGCCGTATCCCCTTACATCT
ATCTATTATTGCGCCCCGTTCATCATGCCCGTTTTGCCGGCGGACATTAACTCCTGCAGAATTAATTCCCATCCTGTCAT
TCCTATTTCAAAAAGGTAAATGTAAAAGCTGCGGGCATAGGATTTCTTTTATGTATCCCGCAGCAGAGCTTGTGACAGCG
TGTTTATTTGCCGCCGCAGGAATACGCTTTGGCACGTCGCTGGAACTGTTTCCCGCTGTGGTGTTTATCTCTCTTCTCAT
TATTGTTGCAGTGACAGATATTCATTTTATGCTGATTCCAAATCGTATATTGATTTTCTTTCTTCCCTTTTTGGCGGCCG
CGAGATTGATTTCTCCGCTTGATTCCTGGTATGCAGGCCTGTTAGGTGCGGCAGCCGGATTTCTATTTCTGGCTGTAATT
GCCGCAATCACCCATGGGGGAGTAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTGCTTGGTGTGAAAAT
GCTGGCAGCTGCCTTTTTCTTTTCTGTTTTGATAGGTGCATTATATGGAGCGGCAGCCGTTCTGACTGGTAGACTCGCTA
AAAGGCAGCCGCTTCCCTTTGCCCCCGCTATAGCCGCAGGGAGCATTTTAGCCTATTTATACGGTGACTCTATCATTTCT
TTTTATATCAAAATGGCATTGGGCTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-90)

Type IV leader peptidase family (Peptidase_A24)

(101-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

99.597

100

0.996