Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   G4G26_RS07450 Genome accession   NZ_CP049924
Coordinates   1435257..1435721 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain So1b     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1430257..1440721
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4G26_RS07430 (G4G26_07465) kinA 1430724..1432544 (+) 1821 WP_015715804.1 sporulation histidine kinase KinA -
  G4G26_RS07435 (G4G26_07470) dapX 1432554..1433735 (-) 1182 WP_014476653.1 aminotransferase A -
  G4G26_RS07440 (G4G26_07475) - 1433937..1434098 (-) 162 WP_003245246.1 hypothetical protein -
  G4G26_RS07445 (G4G26_07480) cheV 1434302..1435213 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  G4G26_RS07450 (G4G26_07485) kre 1435257..1435721 (-) 465 WP_003232406.1 YkyB family protein Regulator
  G4G26_RS07455 (G4G26_07490) ykuC 1435847..1437139 (-) 1293 WP_003245267.1 MFS transporter -
  G4G26_RS07460 (G4G26_07495) ltdD 1437215..1437709 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  G4G26_RS07465 (G4G26_07500) ppeE 1437766..1438626 (-) 861 WP_003232400.1 metallophosphoesterase -
  G4G26_RS07470 (G4G26_07505) fadH 1438769..1439533 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=428723 G4G26_RS07450 WP_003232406.1 1435257..1435721(-) (kre) [Bacillus subtilis strain So1b]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=428723 G4G26_RS07450 WP_003232406.1 1435257..1435721(-) (kre) [Bacillus subtilis strain So1b]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1