Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   G4G26_RS05970 Genome accession   NZ_CP049924
Coordinates   1165528..1165719 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain So1b     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1160528..1170719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4G26_RS05940 (G4G26_05960) argF 1161392..1162351 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  G4G26_RS05945 (G4G26_05965) yjzC 1162437..1162616 (+) 180 WP_003245356.1 YjzC family protein -
  G4G26_RS05950 (G4G26_05970) yjzD 1162662..1162847 (-) 186 WP_029317607.1 DUF2929 domain-containing protein -
  G4G26_RS05955 (G4G26_05975) - 1163096..1163830 (+) 735 WP_003245223.1 hypothetical protein -
  G4G26_RS05960 (G4G26_05980) - 1163912..1164469 (+) 558 WP_003232974.1 hypothetical protein -
  G4G26_RS05965 (G4G26_05985) med 1164560..1165513 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  G4G26_RS05970 (G4G26_05990) comZ 1165528..1165719 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  G4G26_RS05975 (G4G26_05995) yjzB 1165749..1165988 (-) 240 WP_003232972.1 spore coat protein YjzB -
  G4G26_RS05980 (G4G26_06000) fabH 1166153..1167091 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  G4G26_RS05985 (G4G26_06005) fabF 1167114..1168355 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  G4G26_RS05990 (G4G26_06010) yjaZ 1168431..1169216 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  G4G26_RS05995 (G4G26_06015) appD 1169408..1170394 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=428715 G4G26_RS05970 WP_003224559.1 1165528..1165719(+) (comZ) [Bacillus subtilis strain So1b]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=428715 G4G26_RS05970 WP_003224559.1 1165528..1165719(+) (comZ) [Bacillus subtilis strain So1b]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1