Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   G4G26_RS04440 Genome accession   NZ_CP049924
Coordinates   882833..883627 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain So1b     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 877833..888627
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4G26_RS04410 (G4G26_04430) sxzA 878671..879702 (+) 1032 WP_015715532.1 iron ABC transporter permease -
  G4G26_RS04415 (G4G26_04435) yfhB 879818..880699 (+) 882 WP_015715533.1 PhzF family phenazine biosynthesis isomerase -
  G4G26_RS04420 (G4G26_04440) yfhC 880787..881371 (+) 585 WP_003243940.1 nitroreductase -
  G4G26_RS04425 (G4G26_04445) yfhD 881410..881601 (-) 192 WP_003233561.1 YfhD family protein -
  G4G26_RS04430 (G4G26_04450) yfhE 881668..881778 (-) 111 WP_003223230.1 YfhE family protein -
  G4G26_RS04435 (G4G26_04455) yfhF 881833..882744 (-) 912 WP_015715534.1 TIGR01777 family oxidoreductase -
  G4G26_RS04440 (G4G26_04460) recX 882833..883627 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  G4G26_RS04445 (G4G26_04465) yfhH 883629..883943 (+) 315 WP_003244592.1 YfhH family protein -
  G4G26_RS04450 (G4G26_04470) yfhI 884064..885257 (+) 1194 WP_015715535.1 MFS transporter -
  G4G26_RS04455 (G4G26_04475) sspK 885289..885441 (-) 153 WP_015715536.1 small, acid-soluble spore protein K -
  G4G26_RS04460 (G4G26_04480) yfhJ 885566..885835 (+) 270 WP_003243789.1 YfhJ family protein -
  G4G26_RS04465 (G4G26_04485) yfhK 885980..886498 (+) 519 WP_015715537.1 SH3 domain-containing protein -
  G4G26_RS04470 (G4G26_04490) spdL 886583..886915 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  G4G26_RS04475 (G4G26_04495) ephM 886902..887762 (+) 861 WP_015715538.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=428706 G4G26_RS04440 WP_003243354.1 882833..883627(+) (recX) [Bacillus subtilis strain So1b]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=428706 G4G26_RS04440 WP_003243354.1 882833..883627(+) (recX) [Bacillus subtilis strain So1b]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTTCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTATTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1