Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G8A07_RS06610 Genome accession   NZ_CP049919
Coordinates   1413356..1413769 (+) Length   137 a.a.
NCBI ID   WP_305798640.1    Uniprot ID   -
Organism   Roseateles sp. DAIF2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1408356..1418769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8A07_RS06585 (G8A07_06585) mpl 1408505..1409875 (-) 1371 WP_195796268.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase -
  G8A07_RS06590 (G8A07_06590) - 1409878..1410534 (-) 657 WP_195796269.1 HAD family phosphatase -
  G8A07_RS06595 (G8A07_06595) hemL 1410670..1411956 (-) 1287 WP_195796270.1 glutamate-1-semialdehyde 2,1-aminomutase -
  G8A07_RS06600 (G8A07_06600) - 1412015..1412974 (-) 960 WP_249937248.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  G8A07_RS06605 (G8A07_06605) - 1413162..1413314 (+) 153 WP_195796271.1 rubredoxin -
  G8A07_RS06610 (G8A07_06610) pilG 1413356..1413769 (+) 414 WP_305798640.1 PleD family two-component system response regulator Regulator
  G8A07_RS06615 (G8A07_06615) - 1413820..1414185 (+) 366 WP_195796272.1 PleD family two-component system response regulator -
  G8A07_RS06620 (G8A07_06620) - 1414193..1414726 (+) 534 WP_195796273.1 chemotaxis protein CheW -
  G8A07_RS06625 (G8A07_06625) - 1414805..1417075 (+) 2271 WP_195796274.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 137 a.a.        Molecular weight: 15056.26 Da        Isoelectric Point: 6.4585

>NTDB_id=428684 G8A07_RS06610 WP_305798640.1 1413356..1413769(+) (pilG) [Roseateles sp. DAIF2]
MDLQASEGSSTSPAVAAKVLVIDDSNTIRRSAEIFLKQAGHEVVLAEDGFDALAKLSDYQPDLVFCDILMPRLDGYQTCA
IIKRNPQFAALPVIMLSSKDGLFDKARGRMVGSQDYLTKPFTKDQLLQAVQQHRRGA

Nucleotide


Download         Length: 414 bp        

>NTDB_id=428684 G8A07_RS06610 WP_305798640.1 1413356..1413769(+) (pilG) [Roseateles sp. DAIF2]
TTGGATCTGCAGGCTTCGGAAGGTTCCAGCACCAGCCCGGCGGTGGCCGCCAAGGTACTGGTCATTGATGACAGCAACAC
GATACGCCGCAGTGCCGAGATCTTCCTCAAGCAGGCGGGCCACGAGGTGGTGCTGGCCGAGGACGGCTTCGATGCGTTGG
CCAAGCTCAGCGACTACCAGCCCGATCTGGTGTTCTGCGACATCCTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCC
ATCATCAAGCGCAACCCTCAGTTCGCCGCGCTGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCG
CGGCCGCATGGTGGGCTCGCAGGACTACCTGACCAAGCCCTTCACCAAGGACCAGCTGTTGCAGGCCGTGCAGCAGCATC
GCCGCGGCGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(19-131)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.793

84.672

0.54