Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   IF695_RS09925 Genome accession   NZ_CP062393
Coordinates   2000031..2000831 (-) Length   266 a.a.
NCBI ID   WP_240025699.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_AN_009     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1995031..2005831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF695_RS09905 (IF695_09910) - 1996243..1996335 (-) 93 WP_001790000.1 hypothetical protein -
  IF695_RS09910 (IF695_09915) - 1996299..1996433 (+) 135 WP_001790628.1 hypothetical protein -
  IF695_RS09915 (IF695_09920) rlmH 1996638..1997117 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  IF695_RS09920 (IF695_09925) adsA 1997485..1999803 (-) 2319 WP_049309091.1 LPXTG-anchored adenosine synthase AdsA -
  IF695_RS09925 (IF695_09930) vicX 2000031..2000831 (-) 801 WP_240025699.1 MBL fold metallo-hydrolase Regulator
  IF695_RS09930 (IF695_09935) yycI 2001221..2002009 (-) 789 WP_001104172.1 two-component system regulatory protein YycI -
  IF695_RS09935 (IF695_09940) yycH 2002010..2003344 (-) 1335 WP_001060131.1 two-component system activity regulator YycH -
  IF695_RS09940 (IF695_09945) walK 2003337..2005163 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30339.60 Da        Isoelectric Point: 6.3392

>NTDB_id=428673 IF695_RS09925 WP_240025699.1 2000031..2000831(-) (vicX) [Staphylococcus aureus strain NAS_AN_009]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAAHAMTDVIIGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=428673 IF695_RS09925 WP_240025699.1 2000031..2000831(-) (vicX) [Staphylococcus aureus strain NAS_AN_009]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGAAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGCTCATGCAATGACAGACGTGATTATAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477