Detailed information NTG0428671

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G6545_RS15320
• Genome accession: NZ_CP049918
• Coordinates: 3284014..3285192 (-)
• Length: 392 a.a.
• NCBI ID: WP_033456389.1
• Uniprot ID: -
• Organism: Bordetella bronchiseptica strain KVNON-570
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3279014..3290192

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G6545_RS15300	phnC	3279655..3280425 (+)	771	WP_003808589.1	phosphonate ABC transporter ATP-binding protein	-
G6545_RS15305	phnE	3280422..3281312 (+)	891	WP_003808587.1	phosphonate ABC transporter, permease protein PhnE	-
G6545_RS15310	phnE	3281309..3282130 (+)	822	WP_003808584.1	phosphonate ABC transporter, permease protein PhnE	-
G6545_RS15315	-	3282369..3283967 (+)	1599	WP_010925999.1	CYTH and CHAD domain-containing protein	-
G6545_RS15320	pilA	3284014..3285192 (-)	1179	WP_033456389.1	signal recognition particle-docking protein FtsY	Machinery gene
G6545_RS15325	rsmD	3285268..3285888 (+)	621	WP_015064460.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
G6545_RS15330	coaD	3285909..3286418 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
G6545_RS15335	-	3286473..3286724 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
G6545_RS15340	-	3286721..3287938 (+)	1218	WP_003808568.1	benzoate/H(+) symporter BenE family transporter	-
G6545_RS15345	-	3287946..3288332 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 40956.87 Da
• Isoelectric Point: 5.8049

>NTDB_id=428671 G6545_RS15320 WP_033456389.1 3284014..3285192(-) (pilA) [Bordetella bronchiseptica strain KVNON-570]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPAPMPAPQPEPQPEPQPQQPPEPAPPAMASPPVAEPQPP
VAAAPEAPRKASWLSRLKQGLSRTGQNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQ
VKTALRQLLADHLRPLERSFDLGRAQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSR
NNVTVISQDGGDPAAVAFDSVNAGRARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNA
LAQIRAFDAAITLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1179 bp

>NTDB_id=428671 G6545_RS15320 WP_033456389.1 3284014..3285192(-) (pilA) [Bordetella bronchiseptica strain KVNON-570]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAACCGGCCCCGATGCCGGCCCCCCAGCCCGAGCCGCAGC
CCGAGCCGCAGCCGCAACAACCGCCCGAGCCGGCGCCGCCGGCCATGGCGTCGCCGCCTGTCGCCGAGCCGCAGCCACCG
GTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGCCAGAA
CATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGCCGACG
CGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGGCGCAG
GTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCCCAGCC
CCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCAGCGCC
AGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCAGCCGC
AACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGTGCGCG
CAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAAGATCC
GCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGAACGCG
CTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCCAAGGG
CGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGAGGGGT
TGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (108-167)

• SRP54-type protein, GTPase domain (SRP54) (188-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.456	100	0.52