Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   G8D99_RS02125 Genome accession   NZ_CP049916
Coordinates   453136..454017 (+) Length   293 a.a.
NCBI ID   WP_166322168.1    Uniprot ID   A0A6G8S1D2
Organism   Acinetobacter lanii strain 185     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 448136..459017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8D99_RS02095 (G8D99_02095) wrbA 448149..448745 (+) 597 WP_166322160.1 NAD(P)H:quinone oxidoreductase -
  G8D99_RS02100 (G8D99_02100) - 448845..449243 (-) 399 WP_166327454.1 hypothetical protein -
  G8D99_RS02105 (G8D99_02105) - 449576..450553 (+) 978 WP_227554341.1 aliphatic sulfonate ABC transporter substrate-binding protein -
  G8D99_RS02110 (G8D99_02110) - 450632..451207 (-) 576 WP_166322162.1 xanthine phosphoribosyltransferase -
  G8D99_RS02115 (G8D99_02115) - 451301..452014 (-) 714 WP_166322164.1 DUF3108 domain-containing protein -
  G8D99_RS02120 (G8D99_02120) - 452173..452904 (-) 732 WP_166322166.1 hypothetical protein -
  G8D99_RS02125 (G8D99_02125) tonB2 453136..454017 (+) 882 WP_166322168.1 energy transducer TonB Machinery gene
  G8D99_RS02135 (G8D99_02135) - 454371..455462 (-) 1092 WP_166322170.1 mechanosensitive ion channel family protein -
  G8D99_RS02140 (G8D99_02140) ybeY 455726..456208 (-) 483 WP_166322172.1 rRNA maturation RNase YbeY -
  G8D99_RS02145 (G8D99_02145) - 456228..457340 (-) 1113 WP_166322174.1 PhoH family protein -
  G8D99_RS02150 (G8D99_02150) miaB 457380..458837 (-) 1458 WP_166322176.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 293 a.a.        Molecular weight: 33211.93 Da        Isoelectric Point: 9.1762

>NTDB_id=428631 G8D99_RS02125 WP_166322168.1 453136..454017(+) (tonB2) [Acinetobacter lanii strain 185]
MINNSFRSPRTAHPWWQDPLFVAAVVLALLMHVLFLSLQFAMPQNSDVASQDIAVTLRPSVDKIKQADFLAQADQQGSGT
FREAHRMSSDMPAQTDDVSAGEQQLEALEQIQQKRELKFEEKVLMTMLSWQKQTELSERKKAMEELNSQFQAKAAMVASL
EAQYLKKQQNFSRQQKIKTIDGIQAKQDAAAGYLDKFREKVEVYGNRYYPDLAKQQRLSGEVRLMVILNASGGIRAIRLI
ESSGHAILDEAAKNSVRRGAPFGAFDAKMKDISELRIVRTWKFDPADAEFEVR

Nucleotide


Download         Length: 882 bp        

>NTDB_id=428631 G8D99_RS02125 WP_166322168.1 453136..454017(+) (tonB2) [Acinetobacter lanii strain 185]
ATGATCAACAACAGCTTTCGCTCTCCAAGAACAGCGCATCCATGGTGGCAAGATCCACTTTTTGTGGCGGCGGTGGTTTT
GGCATTGTTGATGCATGTGCTGTTTTTATCGCTGCAATTTGCGATGCCGCAAAACAGTGATGTGGCGAGTCAAGATATTG
CAGTGACGCTCCGCCCAAGTGTCGACAAAATTAAACAGGCAGATTTCCTGGCTCAAGCCGATCAGCAAGGCAGTGGCACC
TTCCGTGAAGCTCATCGTATGTCTTCAGACATGCCTGCGCAAACTGATGATGTCAGTGCAGGGGAGCAACAGCTTGAGGC
TTTGGAGCAAATCCAGCAGAAACGTGAACTTAAATTTGAAGAAAAAGTCTTGATGACCATGCTCAGTTGGCAAAAGCAAA
CAGAGCTCAGTGAGCGTAAAAAAGCCATGGAGGAATTGAACAGTCAATTCCAAGCCAAAGCTGCTATGGTGGCGAGTTTA
GAAGCGCAGTATTTAAAGAAACAACAAAATTTTAGTCGTCAGCAAAAAATCAAAACTATTGATGGTATTCAAGCCAAGCA
AGATGCTGCCGCAGGGTATCTTGATAAATTCCGTGAAAAAGTCGAAGTCTATGGCAACCGCTATTATCCTGATTTGGCCA
AACAACAACGTCTTTCGGGTGAAGTTCGTCTAATGGTGATTTTAAATGCATCAGGCGGTATTCGCGCGATTCGTTTGATT
GAAAGTTCAGGTCATGCGATTTTAGATGAAGCAGCAAAAAATTCAGTCCGCCGTGGTGCACCTTTTGGGGCATTCGACGC
CAAGATGAAAGATATATCTGAGCTTAGAATTGTGCGGACTTGGAAATTTGATCCTGCTGATGCTGAATTTGAAGTGCGCT
GA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(206-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G8S1D2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

74.552

95.222

0.71