Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   G8D99_RS01525 Genome accession   NZ_CP049916
Coordinates   339813..342035 (-) Length   740 a.a.
NCBI ID   WP_166321993.1    Uniprot ID   -
Organism   Acinetobacter lanii strain 185     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 334813..347035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8D99_RS01500 (G8D99_01500) - 334973..335236 (-) 264 WP_166321983.1 YdcH family protein -
  G8D99_RS01505 (G8D99_01505) - 335358..335696 (-) 339 WP_166321985.1 chaperone modulator CbpM -
  G8D99_RS01510 (G8D99_01510) - 335709..336701 (-) 993 WP_166321987.1 DnaJ C-terminal domain-containing protein -
  G8D99_RS01515 (G8D99_01515) - 336888..337763 (-) 876 WP_166321989.1 Hsp33 family molecular chaperone HslO -
  G8D99_RS01520 (G8D99_01520) - 337939..339694 (-) 1756 Protein_293 monovalent cation:proton antiporter-2 (CPA2) family protein -
  G8D99_RS01525 (G8D99_01525) priA 339813..342035 (-) 2223 WP_166321993.1 primosomal protein N' Machinery gene
  G8D99_RS01530 (G8D99_01530) gspF 342186..343391 (+) 1206 WP_166321995.1 type II secretion system inner membrane protein GspF -
  G8D99_RS01535 (G8D99_01535) gspG 343473..343910 (+) 438 WP_166321997.1 type II secretion system major pseudopilin GspG -
  G8D99_RS01540 (G8D99_01540) - 344192..344527 (+) 336 WP_166321999.1 hypothetical protein -
  G8D99_RS01545 (G8D99_01545) lnt 344601..346160 (-) 1560 WP_166322001.1 apolipoprotein N-acyltransferase -
  G8D99_RS01550 (G8D99_01550) - 346157..346996 (-) 840 WP_166322003.1 HlyC/CorC family transporter -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83923.96 Da        Isoelectric Point: 8.6011

>NTDB_id=428628 G8D99_RS01525 WP_166321993.1 339813..342035(-) (priA) [Acinetobacter lanii strain 185]
MTNTCLNSSDLYRIRVAVPVHVYDCFDYKVSQVEYDQIQVGARVAVPFGRQHLTGVVTEKLSPDTPIDPRFQLKAITELL
DDHAIIDDKVLKLAGWAAQYYQFPIGEVMHTALPTLLRQGKPYNLLARTWKVLDEHAEAKVKRSEKQQEAYKVLKLHPHG
TLETILNLSGIETATLKAIEKKGIIRCELENQNFSPEPLQLAQMPLTANDEQKKAIQTILKAQNKYQGFLLDGLTGSGKT
EVYLQVMHEVLKQGKQVLVLVPEIGLTPQTVSRFQSRFHCNIALLHSGLNDSKRLQAWQHAQTGKASIILGTRSALFTPM
PKLGLIILDEEHDLSFKQHEGFRYHARDVAMYRAHLEQCPIVLGSATPSIDSFSLAQQGKLTHLQLNHRAGGALMPKMHL
IDLKIAKKQHGISDTLIKEIQIRLDKKEQVLIFLNRRGYAPVLICESCAWQANCPHCDAHFTLHKKPYEHLHCHHCGTIN
RVPDACPQCNQQTLKPIGMGTAKVEESLNELFPDHPVLRVDRDSTSRVGSWQKIYDQIHQSEPMILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIIQVAGRAGRGDKKGEVYVQTLRPDHPLFNTLIHKDYRAFAKATLADRQLALM
PPCRYAVLLRCESKNQEDNQRFLTEMTQLLRQHAGDLIDIWGPIPAPMERKAGRYQAHVVLLSQDRAKMHFYVREWWQQV
LHYKPSSMKVSIDVDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=428628 G8D99_RS01525 WP_166321993.1 339813..342035(-) (priA) [Acinetobacter lanii strain 185]
ATGACAAATACTTGTTTAAATAGCTCAGATCTTTACCGCATTCGTGTTGCTGTGCCTGTGCATGTCTATGATTGTTTTGA
CTATAAAGTCTCACAAGTTGAATATGATCAGATTCAAGTTGGGGCACGTGTTGCCGTGCCTTTTGGCCGTCAACATCTGA
CGGGTGTGGTGACTGAAAAACTCAGCCCAGATACCCCAATCGATCCACGCTTTCAGCTAAAAGCCATCACTGAGCTGTTA
GATGATCATGCCATTATCGATGACAAGGTTTTAAAATTAGCGGGCTGGGCAGCGCAATATTATCAATTCCCGATCGGTGA
AGTAATGCATACCGCCCTGCCGACTTTATTGCGCCAAGGTAAACCGTATAATCTTTTGGCGCGTACATGGAAAGTGCTAG
ATGAACATGCAGAAGCCAAAGTCAAACGCTCTGAAAAACAACAAGAAGCCTATAAAGTTTTAAAGTTGCATCCGCATGGG
ACTTTAGAAACGATTTTGAATTTAAGTGGCATCGAAACTGCAACTTTAAAAGCGATTGAAAAAAAAGGCATTATCCGCTG
TGAATTAGAAAACCAAAATTTCAGCCCAGAACCGTTGCAATTGGCACAAATGCCGTTGACCGCCAACGATGAACAAAAAA
AAGCGATTCAAACGATTTTAAAAGCACAAAACAAATATCAAGGTTTTTTACTCGATGGTTTGACGGGTAGTGGTAAAACC
GAAGTCTATTTGCAAGTCATGCATGAGGTGCTGAAACAAGGCAAACAAGTATTGGTGTTGGTGCCCGAAATTGGACTGAC
CCCACAGACGGTTAGCCGTTTTCAATCTCGTTTTCATTGCAACATTGCGCTATTACATTCGGGATTGAATGACTCGAAAC
GCTTACAAGCTTGGCAACATGCACAAACAGGGAAAGCCTCGATTATTTTAGGTACACGTTCTGCGCTGTTTACCCCTATG
CCCAAATTGGGCTTGATCATTTTAGATGAAGAGCACGACCTGTCTTTTAAACAGCATGAGGGCTTTCGCTATCATGCCCG
TGATGTTGCCATGTACCGCGCGCATTTAGAGCAATGTCCGATTGTTTTAGGTTCAGCCACACCGAGCATTGACAGTTTCT
CTTTGGCACAACAGGGCAAATTGACCCATTTGCAATTGAATCATCGTGCCGGTGGGGCGTTGATGCCAAAAATGCATTTG
ATTGATCTAAAAATTGCCAAGAAGCAGCATGGCATTTCAGACACACTGATCAAAGAAATCCAAATCCGTTTGGACAAAAA
AGAACAGGTGCTGATTTTCCTGAATCGTCGCGGTTATGCCCCTGTGCTGATTTGTGAAAGCTGCGCATGGCAAGCCAATT
GTCCGCACTGTGATGCACACTTTACCCTGCATAAAAAGCCGTATGAGCATTTGCATTGTCATCATTGTGGCACCATCAAC
CGTGTGCCTGATGCCTGTCCTCAGTGTAATCAGCAAACCTTAAAGCCGATTGGCATGGGCACCGCAAAGGTTGAAGAAAG
CCTGAATGAACTGTTTCCCGATCATCCAGTGCTTCGGGTCGATCGAGATTCCACTTCTCGGGTCGGCAGTTGGCAAAAGA
TTTATGATCAAATTCATCAAAGTGAACCGATGATTCTATTGGGCACCCAAATGTTGGCCAAAGGGCATCATTTTCCTTAT
GTCACCCTTGTGGCGATTTTGGATATCGACTCAGGTTTGCTCAGTGTCGATTTTCGTGCCACTGAGCGTACTGCGCAACT
GATCATACAAGTGGCAGGTCGTGCAGGACGGGGCGATAAAAAAGGTGAGGTGTATGTACAAACACTTCGTCCTGATCATC
CGCTATTTAATACCCTGATTCATAAAGACTACCGTGCTTTTGCCAAAGCTACCTTGGCCGACCGTCAATTGGCACTGATG
CCGCCTTGTCGCTATGCGGTATTGTTACGTTGTGAATCTAAAAACCAAGAAGATAATCAACGGTTTTTAACCGAGATGAC
CCAACTGTTAAGACAACATGCGGGCGATTTGATCGATATTTGGGGGCCGATTCCTGCGCCCATGGAACGTAAAGCCGGTC
GCTACCAAGCACATGTAGTATTGCTATCACAGGATCGTGCCAAAATGCATTTCTATGTCCGAGAATGGTGGCAACAGGTG
TTGCATTACAAGCCCTCGAGCATGAAAGTCAGTATTGATGTCGACCCACAAGAACTGAGTTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

DEAD/DEAH box helicase (DEAD)

(210-369)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.024

100

0.712